Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M09
(103 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 32 0.30
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 32 0.30
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 32 0.30
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 32 0.30
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 32 0.30
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 32 0.30
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 32 0.30
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 32 0.30
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 32 0.30
BC107593-1|AAI07594.1| 503|Homo sapiens FMN1 protein protein. 28 4.8
BC103692-1|AAI03693.1| 503|Homo sapiens FMN1 protein protein. 28 4.8
BC098386-1|AAH98386.1| 336|Homo sapiens vacuolar protein sortin... 28 4.8
BC014128-1|AAH14128.1| 336|Homo sapiens vacuolar protein sortin... 28 4.8
BC009747-1|AAH09747.1| 336|Homo sapiens vacuolar protein sortin... 28 4.8
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 28 4.8
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +1
Query: 7 QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVG 102
QTE+A+QKQ T+F N+K + K K R+ KN+G
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIG 41
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +1
Query: 7 QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVG 102
QTE+A+QKQ T+F N+K + K K R+ KN+G
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIG 41
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +1
Query: 7 QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVG 102
QTE+A+QKQ T+F N+K + K K R+ KN+G
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIG 41
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +1
Query: 7 QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVG 102
QTE+A+QKQ T+F N+K + K K R+ KN+G
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIG 41
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +1
Query: 7 QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVG 102
QTE+A+QKQ T+F N+K + K K R+ KN+G
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIG 41
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +1
Query: 7 QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVG 102
QTE+A+QKQ T+F N+K + K K R+ KN+G
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIG 41
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +1
Query: 7 QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVG 102
QTE+A+QKQ T+F N+K + K K R+ KN+G
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIG 41
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +1
Query: 7 QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVG 102
QTE+A+QKQ T+F N+K + K K R+ KN+G
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIG 41
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
Frame = +1
Query: 7 QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVG 102
QTE+A+QKQ T+F N+K + K K R+ KN+G
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIG 41
>BC107593-1|AAI07594.1| 503|Homo sapiens FMN1 protein protein.
Length = 503
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 3 GSDRESVSETGDGVPQSQGGHEK 71
G + + S++G GVPQ+QGG K
Sbjct: 372 GCNADQESQSGPGVPQTQGGEVK 394
>BC103692-1|AAI03693.1| 503|Homo sapiens FMN1 protein protein.
Length = 503
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 3 GSDRESVSETGDGVPQSQGGHEK 71
G + + S++G GVPQ+QGG K
Sbjct: 372 GCNADQESQSGPGVPQTQGGEVK 394
>BC098386-1|AAH98386.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 4 DQTEKAFQKQATVFLNRKGGMKRKDMRH 87
D+ E+ + KQ V L RKG + RK M H
Sbjct: 278 DEEERRYFKQQEVVLWRKGDIVRKSMSH 305
>BC014128-1|AAH14128.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 4 DQTEKAFQKQATVFLNRKGGMKRKDMRH 87
D+ E+ + KQ V L RKG + RK M H
Sbjct: 278 DEEERRYFKQQEVVLWRKGDIVRKSMSH 305
>BC009747-1|AAH09747.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 4 DQTEKAFQKQATVFLNRKGGMKRKDMRH 87
D+ E+ + KQ V L RKG + RK M H
Sbjct: 278 DEEERRYFKQQEVVLWRKGDIVRKSMSH 305
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 3 GSDRESVSETGDGVPQSQGGHEK 71
G + + S++G GVPQ+QGG K
Sbjct: 20 GCNADQESQSGPGVPQTQGGEVK 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.127 0.347
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,589,029
Number of Sequences: 237096
Number of extensions: 182400
Number of successful extensions: 540
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 76,859,062
effective HSP length: 14
effective length of database: 73,539,718
effective search space used: 1397254642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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