Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M08
         (279 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CDDAF Cluster: Zinc finger, C2H2 type family pr...    33   1.2  
UniRef50_Q4A9Z2 Cluster: Putative uncharacterized protein; n=5; ...    31   3.8  
UniRef50_UPI00015B4B86 Cluster: PREDICTED: hypothetical protein;...    30   8.7  
UniRef50_Q5NDG1 Cluster: Alpha-2,6-sialyltransferase; n=5; Clupe...    30   8.7  
UniRef50_Q9ZJD3 Cluster: Putative; n=4; Helicobacter|Rep: Putati...    30   8.7  

>UniRef50_UPI00006CDDAF Cluster: Zinc finger, C2H2 type family
            protein; n=1; Tetrahymena thermophila SB210|Rep: Zinc
            finger, C2H2 type family protein - Tetrahymena
            thermophila SB210
          Length = 3822

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +2

Query: 2    KCAIFKMIAKKYIVHNXIWSVYLTKVI-SK*LRKHADLKDMNFGEAVSSVDHI 157
            +C +FK +   +++   +WSV+L + + S  L++  D +   F +A+  V++I
Sbjct: 2786 ECTLFKNLNHDHVIWQRLWSVFLDQFLNSAHLKQQIDTEHTIFAQALDQVENI 2838


>UniRef50_Q4A9Z2 Cluster: Putative uncharacterized protein; n=5;
           Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
           protein - Mycoplasma hyopneumoniae (strain J / ATCC
           25934 / NCTC 10110)
          Length = 355

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 20/79 (25%), Positives = 36/79 (45%)
 Frame = +2

Query: 8   AIFKMIAKKYIVHNXIWSVYLTKVISK*LRKHADLKDMNFGEAVSSVDHITLKLGDNTRV 187
           AI+  IA      N  W+ ++     K L +  +LK  N       +++  L+   N+ +
Sbjct: 116 AIYSFIAFFGFFLNAFWAKFVIYFFKKFLYRKYNLK--NKTTTFEFLENFNLESFVNSVL 173

Query: 188 TDGVNCRYRKQKYEISCWK 244
            D  NC+ +++K    CWK
Sbjct: 174 VDTENCKKKRKKSRKICWK 192


>UniRef50_UPI00015B4B86 Cluster: PREDICTED: hypothetical protein; n=1;
            Nasonia vitripennis|Rep: PREDICTED: hypothetical protein
            - Nasonia vitripennis
          Length = 2860

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +1

Query: 4    MRNI*NDSEKVYSSQPHLVGVPNESDFKIVEE 99
            + NI N++ K +  QPHLV V +E +  +++E
Sbjct: 2019 LTNICNEANKSFEDQPHLVHVKHEENNDMIDE 2050


>UniRef50_Q5NDG1 Cluster: Alpha-2,6-sialyltransferase; n=5;
           Clupeocephala|Rep: Alpha-2,6-sialyltransferase - Danio
           rerio (Zebrafish) (Brachydanio rerio)
          Length = 291

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 244 LPTGYFVFLLSIPAIDSISHTGIISQFQRDMVNARHSFTKIHIFQ 110
           L TG+F  +L++   DSI   G+I        NA HSF   H ++
Sbjct: 195 LSTGFFTMILALEVCDSILVYGMIDGSY--CSNANHSFVPYHYYE 237


>UniRef50_Q9ZJD3 Cluster: Putative; n=4; Helicobacter|Rep: Putative
           - Helicobacter pylori J99 (Campylobacter pylori J99)
          Length = 376

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -3

Query: 256 PITQLPTGYFVFLLSIPAIDSISHTGIISQFQRDMVNAR-HSFTKIHIFQISMLPQLF 86
           P   LP+   VF+  +PA   IS  G ++Q   + ++   H +  I IF +S +  +F
Sbjct: 307 PFESLPSYLQVFVQIVPAYHGISLLGRLNQMHAEFIDVSIHFYALIAIFIVSFIGCVF 364


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,598,086
Number of Sequences: 1657284
Number of extensions: 5104504
Number of successful extensions: 13015
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13013
length of database: 575,637,011
effective HSP length: 70
effective length of database: 459,627,131
effective search space used: 10111796882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)