Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M08
(279 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC125162-1|AAI25163.1| 544|Homo sapiens NBPF4 protein protein. 28 6.1
BC125161-1|AAI25162.1| 573|Homo sapiens NBPF4 protein protein. 28 6.1
BC050328-1|AAH50328.2| 290|Homo sapiens neuroblastoma breakpoin... 28 6.1
AL392088-1|CAI23469.1| 649|Homo sapiens novel protein similar t... 28 6.1
AL390038-2|CAH70399.1| 649|Homo sapiens novel protein similar t... 28 6.1
AL359258-3|CAI14514.1| 638|Homo sapiens novel protein protein. 28 6.1
Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency vi... 27 8.0
X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1... 27 8.0
U03486-1|AAA60457.2| 358|Homo sapiens connexin40 protein. 27 8.0
L34954-1|AAA91833.1| 358|Homo sapiens connexin 40 protein. 27 8.0
BT019416-1|AAV38223.1| 358|Homo sapiens gap junction protein, a... 27 8.0
BT019415-1|AAV38222.1| 358|Homo sapiens gap junction protein, a... 27 8.0
BC013313-1|AAH13313.1| 358|Homo sapiens GJA5 protein protein. 27 8.0
AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency ... 27 8.0
AL365260-2|CAI14125.1| 252|Homo sapiens gap junction protein, a... 27 8.0
AL365260-1|CAI14124.1| 358|Homo sapiens gap junction protein, a... 27 8.0
AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency ... 27 8.0
AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency ... 27 8.0
AF151979-1|AAD37801.1| 358|Homo sapiens connexin 40 protein. 27 8.0
>BC125162-1|AAI25163.1| 544|Homo sapiens NBPF4 protein protein.
Length = 544
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 201 LTPSVTRVLSPNFNVIWSTLDTASPKFIS 115
LTPS+ L+P+++ WSTL + K +S
Sbjct: 366 LTPSILPDLTPSYHPYWSTLYSFEDKQVS 394
>BC125161-1|AAI25162.1| 573|Homo sapiens NBPF4 protein protein.
Length = 573
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 201 LTPSVTRVLSPNFNVIWSTLDTASPKFIS 115
LTPS+ L+P+++ WSTL + K +S
Sbjct: 395 LTPSILPDLTPSYHPYWSTLYSFEDKQVS 423
>BC050328-1|AAH50328.2| 290|Homo sapiens neuroblastoma breakpoint
family, member 22 (pseudogene) protein.
Length = 290
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 201 LTPSVTRVLSPNFNVIWSTLDTASPKFIS 115
LTPS+ L+P+++ WSTL + K +S
Sbjct: 100 LTPSILPDLTPSYHPYWSTLYSFEDKQVS 128
>AL392088-1|CAI23469.1| 649|Homo sapiens novel protein similar to
FLJ32883 containing DUF1220 domains protein.
Length = 649
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 201 LTPSVTRVLSPNFNVIWSTLDTASPKFIS 115
LTPS+ L+P+++ WSTL + K +S
Sbjct: 377 LTPSILPDLTPSYHPYWSTLYSFEDKQVS 405
>AL390038-2|CAH70399.1| 649|Homo sapiens novel protein similar to
FLJ32883 containing DUF1220 domains protein.
Length = 649
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 201 LTPSVTRVLSPNFNVIWSTLDTASPKFIS 115
LTPS+ L+P+++ WSTL + K +S
Sbjct: 377 LTPSILPDLTPSYHPYWSTLYSFEDKQVS 405
>AL359258-3|CAI14514.1| 638|Homo sapiens novel protein protein.
Length = 638
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 201 LTPSVTRVLSPNFNVIWSTLDTASPKFIS 115
LTPS+ L+P+++ WSTL + K +S
Sbjct: 366 LTPSILPDLTPSYHPYWSTLYSFEDKQVS 394
>Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 274 SSKPKCPITQLPTGYFVFLLSIPAIDSISHT 182
S PK P T VFLLS+P++D + T
Sbjct: 807 SDIPKSPFTPTEKSKQVFLLSVPSLDCLPIT 837
>X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1
gene for a DNA-binding protein. ).
Length = 2717
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 274 SSKPKCPITQLPTGYFVFLLSIPAIDSISHT 182
S PK P T VFLLS+P++D + T
Sbjct: 806 SDIPKSPFTPTEKSKQVFLLSVPSLDCLPIT 836
>U03486-1|AAA60457.2| 358|Homo sapiens connexin40 protein.
Length = 358
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 218 QKYEISCWKLGNGTFRLGG 274
+K E+SCW+ GNG L G
Sbjct: 129 EKAELSCWEEGNGRIALQG 147
>L34954-1|AAA91833.1| 358|Homo sapiens connexin 40 protein.
Length = 358
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 218 QKYEISCWKLGNGTFRLGG 274
+K E+SCW+ GNG L G
Sbjct: 129 EKAELSCWEEGNGRIALQG 147
>BT019416-1|AAV38223.1| 358|Homo sapiens gap junction protein,
alpha 5, 40kDa (connexin 40) protein.
Length = 358
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 218 QKYEISCWKLGNGTFRLGG 274
+K E+SCW+ GNG L G
Sbjct: 129 EKAELSCWEEGNGRIALQG 147
>BT019415-1|AAV38222.1| 358|Homo sapiens gap junction protein,
alpha 5, 40kDa (connexin 40) protein.
Length = 358
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 218 QKYEISCWKLGNGTFRLGG 274
+K E+SCW+ GNG L G
Sbjct: 129 EKAELSCWEEGNGRIALQG 147
>BC013313-1|AAH13313.1| 358|Homo sapiens GJA5 protein protein.
Length = 358
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 218 QKYEISCWKLGNGTFRLGG 274
+K E+SCW+ GNG L G
Sbjct: 129 EKAELSCWEEGNGRIALQG 147
>AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency
virus type I enhancer binding protein 1 protein.
Length = 2717
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 274 SSKPKCPITQLPTGYFVFLLSIPAIDSISHT 182
S PK P T VFLLS+P++D + T
Sbjct: 807 SDIPKSPFTPTEKSKQVFLLSVPSLDCLPIT 837
>AL365260-2|CAI14125.1| 252|Homo sapiens gap junction protein,
alpha 5, 40kDa protein.
Length = 252
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 218 QKYEISCWKLGNGTFRLGG 274
+K E+SCW+ GNG L G
Sbjct: 129 EKAELSCWEEGNGRIALQG 147
>AL365260-1|CAI14124.1| 358|Homo sapiens gap junction protein,
alpha 5, 40kDa protein.
Length = 358
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 218 QKYEISCWKLGNGTFRLGG 274
+K E+SCW+ GNG L G
Sbjct: 129 EKAELSCWEEGNGRIALQG 147
>AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency
virus type I enhancer binding protein 1 protein.
Length = 2717
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 274 SSKPKCPITQLPTGYFVFLLSIPAIDSISHT 182
S PK P T VFLLS+P++D + T
Sbjct: 807 SDIPKSPFTPTEKSKQVFLLSVPSLDCLPIT 837
>AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency
virus type I enhancer binding protein 1 protein.
Length = 2717
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 274 SSKPKCPITQLPTGYFVFLLSIPAIDSISHT 182
S PK P T VFLLS+P++D + T
Sbjct: 807 SDIPKSPFTPTEKSKQVFLLSVPSLDCLPIT 837
>AF151979-1|AAD37801.1| 358|Homo sapiens connexin 40 protein.
Length = 358
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 218 QKYEISCWKLGNGTFRLGG 274
+K E+SCW+ GNG L G
Sbjct: 129 EKAELSCWEEGNGRIALQG 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,088,173
Number of Sequences: 237096
Number of extensions: 699780
Number of successful extensions: 1317
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1325771524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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