Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M08
         (279 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70212-9|CAA94168.1|  491|Caenorhabditis elegans Hypothetical pr...    27   2.6  
Z50742-6|CAA90619.1|  491|Caenorhabditis elegans Hypothetical pr...    27   2.6  
U67951-2|AAB07570.2|  302|Caenorhabditis elegans Regulator of fu...    26   4.6  
U67951-1|AAQ65207.1|  315|Caenorhabditis elegans Regulator of fu...    26   4.6  
AY115477-1|AAM55473.1|  303|Caenorhabditis elegans zinc finger p...    26   4.6  
U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas...    25   8.0  
U41543-8|AAB37025.2|  393|Caenorhabditis elegans Hypothetical pr...    25   8.0  
AL110477-3|CAB54326.1|  314|Caenorhabditis elegans Hypothetical ...    25   8.0  
AC025716-22|AAK39613.1|  630|Caenorhabditis elegans Zwilch (dros...    25   8.0  

>Z70212-9|CAA94168.1|  491|Caenorhabditis elegans Hypothetical
           protein R04D3.1 protein.
          Length = 491

 Score = 26.6 bits (56), Expect = 2.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 49  VVNYILFRYHFKY 11
           V+N +LF YHFKY
Sbjct: 176 VINQVLFGYHFKY 188


>Z50742-6|CAA90619.1|  491|Caenorhabditis elegans Hypothetical
           protein R04D3.1 protein.
          Length = 491

 Score = 26.6 bits (56), Expect = 2.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 49  VVNYILFRYHFKY 11
           V+N +LF YHFKY
Sbjct: 176 VINQVLFGYHFKY 188


>U67951-2|AAB07570.2|  302|Caenorhabditis elegans Regulator of
           fusion protein 2,isoform a protein.
          Length = 302

 Score = 25.8 bits (54), Expect = 4.6
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = -2

Query: 140 TQLHQN---SYLSNQHASSTILKSLSLGTPTKXGCELYTFS 27
           T++H+N   S LS +H  S+   + S+GTPT    E  TFS
Sbjct: 218 TKVHENEKKSQLSPEHDESSDSGNASIGTPTTD--ESLTFS 256


>U67951-1|AAQ65207.1|  315|Caenorhabditis elegans Regulator of
           fusion protein 2,isoform b protein.
          Length = 315

 Score = 25.8 bits (54), Expect = 4.6
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = -2

Query: 140 TQLHQN---SYLSNQHASSTILKSLSLGTPTKXGCELYTFS 27
           T++H+N   S LS +H  S+   + S+GTPT    E  TFS
Sbjct: 231 TKVHENEKKSQLSPEHDESSDSGNASIGTPTTD--ESLTFS 269


>AY115477-1|AAM55473.1|  303|Caenorhabditis elegans zinc finger
           protein REF-2 protein.
          Length = 303

 Score = 25.8 bits (54), Expect = 4.6
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = -2

Query: 140 TQLHQN---SYLSNQHASSTILKSLSLGTPTKXGCELYTFS 27
           T++H+N   S LS +H  S+   + S+GTPT    E  TFS
Sbjct: 219 TKVHENEKKSQLSPEHDESSDSGNASIGTPTTD--ESLTFS 257


>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
           protein 11 protein.
          Length = 1032

 Score = 25.0 bits (52), Expect = 8.0
 Identities = 8/37 (21%), Positives = 22/37 (59%)
 Frame = -3

Query: 229 FVFLLSIPAIDSISHTGIISQFQRDMVNARHSFTKIH 119
           ++F+  +P ++S  H G ++    +++++  +FT  H
Sbjct: 874 YMFVSGLPEVNSYLHAGEVASASLELLDSIKTFTVSH 910


>U41543-8|AAB37025.2|  393|Caenorhabditis elegans Hypothetical
           protein F46H5.8 protein.
          Length = 393

 Score = 25.0 bits (52), Expect = 8.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 195 ESIAGIESRNTKYPVGSWVMGHFG 266
           E   G   + TK P G W+ GH G
Sbjct: 321 EENKGYGFQYTKNPKGQWIFGHSG 344


>AL110477-3|CAB54326.1|  314|Caenorhabditis elegans Hypothetical
           protein Y113G7B.4 protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 8.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 213 LYLQLTPSVTRVLSPNF 163
           +Y +LTP   RV +PNF
Sbjct: 268 IYDELTPEAARVFNPNF 284


>AC025716-22|AAK39613.1|  630|Caenorhabditis elegans Zwilch
           (drosophila) homolog protein1 protein.
          Length = 630

 Score = 25.0 bits (52), Expect = 8.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 204 AGIESRNTKYPVGSWVMGHFGLEDS 278
           AG  +RN ++   + V+GHF  E+S
Sbjct: 190 AGRTNRNVQFAAATRVLGHFNNENS 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,647,434
Number of Sequences: 27780
Number of extensions: 125766
Number of successful extensions: 332
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 248937694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)