Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M07
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   1.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   8.6  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 293 WNNSRQNRYGQRRVRDASRTK 355
           W   R+N    +R RDA R K
Sbjct: 139 WEKRRKNNEAAKRSRDARRAK 159


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +3

Query: 159 MDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTFDQLPPEE 278
           M H    +H ++   + Q  H  + G+  A    Q PP +
Sbjct: 167 MGHHMQEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPPHQ 206


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +3

Query: 159 MDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTFDQLPPEE 278
           M H    +H ++   + Q  H  + G+  A    Q PP +
Sbjct: 169 MGHHMQEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPPHQ 208


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 348 RLASRTRRCPY 316
           RLA+R+RRC Y
Sbjct: 607 RLAARSRRCCY 617


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 348 RLASRTRRCPY 316
           RLA+R+RRC Y
Sbjct: 499 RLAARSRRCCY 509


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 309 CRLLFQVFSYSLP 271
           C+++ Q FSY+ P
Sbjct: 399 CKIMIQGFSYAFP 411


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 309 CRLLFQVFSYSLP 271
           C+++ Q FSY+ P
Sbjct: 399 CKIMIQGFSYAFP 411


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 309 CRLLFQVFSYSLP 271
           C+++ Q FSY+ P
Sbjct: 399 CKIMIQGFSYAFP 411


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 309 CRLLFQVFSYSLP 271
           C+++ Q FSY+ P
Sbjct: 399 CKIMIQGFSYAFP 411


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +3

Query: 384 YIDDDVERHWKQHNPSNEPSIPWDVS 461
           YIDD+V+   KQ+N ++  ++   ++
Sbjct: 173 YIDDNVKGLGKQYNIASSKTLKLSIN 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,168
Number of Sequences: 336
Number of extensions: 3292
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)