Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M07
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0067 - 11863092-11863104,11863432-11863547,11863610-118639... 33 0.14
12_01_0217 + 1647319-1648327,1648462-1648577,1648650-1648817,164... 32 0.44
11_01_0216 + 1693889-1694897,1695034-1695149,1695222-1695389,169... 32 0.44
06_01_0506 + 3648546-3649256 32 0.44
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 31 0.58
01_06_1584 - 38441654-38442847 31 0.58
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 31 1.0
12_02_1045 + 25656495-25656566,25657788-25657884,25658327-256584... 30 1.3
03_06_0239 - 32578231-32578353,32578431-32578655,32579081-325792... 30 1.8
01_01_0226 - 1930276-1930821 30 1.8
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 29 2.3
03_05_0739 + 27271404-27271988,27272265-27272411 29 2.3
02_02_0103 + 6797830-6798433,6799412-6799480,6799573-6799664,679... 29 2.3
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 29 3.1
07_03_0917 - 22574472-22574558,22574756-22574821,22574848-225748... 29 3.1
08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811 29 4.1
07_01_0437 - 3322132-3322251,3322345-3322569,3322953-3323120,332... 29 4.1
01_07_0258 - 42350630-42350716,42351031-42351081,42351166-423511... 29 4.1
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 29 4.1
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 29 4.1
01_06_1502 + 37807954-37808050,37808161-37808378,37808482-378090... 28 5.4
07_03_0539 - 19237573-19239169,19239258-19239410,19239505-192395... 28 7.1
02_02_0348 - 9233032-9233154,9233233-9233311,9233387-9233511,923... 28 7.1
06_01_0075 + 615415-616061,616144-616295,616829-617865 27 9.4
04_04_0786 - 28052981-28053040,28053123-28053222,28053447-280535... 27 9.4
>08_02_0067 -
11863092-11863104,11863432-11863547,11863610-11863950,
11864978-11865331,11866055-11866150,11866812-11866980,
11867541-11867618,11867745-11867926,11868010-11868094,
11868545-11868648,11869510-11869590,11870123-11870240,
11871299-11871430,11871635-11871788,11871838-11871917
Length = 700
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 499 VSYLIKQQTKRICERRFLHTNEHIFSYHIHHRHVLHLSI 615
V+ ++ +Q + IC R L +E + +YH+ H LHL +
Sbjct: 135 VTGILSEQQRLICRGRVLKDDELLSAYHVEDGHTLHLVV 173
>12_01_0217 +
1647319-1648327,1648462-1648577,1648650-1648817,
1648911-1649038,1649121-1649220,1649329-1649433
Length = 541
Score = 31.9 bits (69), Expect = 0.44
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 273 EESKRRLGIIVDKIDTDNDGFVTLVELKDWIRYTQKRYIDDDVER 407
EE + L + ID DN G +TL ELK+ + ++ D+++E+
Sbjct: 383 EEEIKGLKEMFKNIDKDNSGTITLEELKNGLAKQGTKFSDNEIEQ 427
>11_01_0216 +
1693889-1694897,1695034-1695149,1695222-1695389,
1695482-1695609,1695692-1695791,1696124-1696168
Length = 521
Score = 31.9 bits (69), Expect = 0.44
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 273 EESKRRLGIIVDKIDTDNDGFVTLVELKDWIRYTQKRYIDDDVER 407
EE + L + ID DN G +TL ELK+ + ++ D+++E+
Sbjct: 383 EEEIKGLKEMFKNIDKDNSGTITLEELKNGLAKQGTKFSDNEIEQ 427
>06_01_0506 + 3648546-3649256
Length = 236
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +3
Query: 234 GEDQAKTFDQLPPEESKRR-----LGIIVDKIDTDNDGFVTLVELKDWIR 368
GE+ + P EE +R LGI+ D D DGF+T EL++ ++
Sbjct: 40 GEEVVVVAKKRPEEEPRRPDPDADLGIVFSTFDHDGDGFITAAELEESLK 89
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 273 EESKRRLGIIVDKIDTDNDGFVTLVELKDWIRYTQKRYIDDDVERHWKQ 419
E L V+ +D DN+G +T E +D++ +++ HW++
Sbjct: 162 EIDDEELARFVEHVDKDNNGIITFEEWRDFLLLYPNEVTIENIYHHWER 210
>01_06_1584 - 38441654-38442847
Length = 397
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 536 ASDVFSIQTSTYFHTISITAMFCIYPLIYYSNR 634
A+D F + T T F ++ +FCI+ IY+ R
Sbjct: 7 AADAFGVATITLFAIFAVLGLFCIFQSIYFRFR 39
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 273 EESKRRLGIIVDKIDTDNDGFVTLVELKDWIRYTQKRYIDDDVERHWKQ 419
E L V+ +D DN+G +T E +D++ +++ HW++
Sbjct: 163 EIDDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWER 211
>12_02_1045 +
25656495-25656566,25657788-25657884,25658327-25658419,
25658524-25658644,25659115-25659181,25659261-25659302,
25659455-25659583,25659674-25659733,25659887-25659929,
25660198-25660280,25660496-25661002,25661088-25661588
Length = 604
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 361 GYGTLRNDTSTMTSRGTGSNTTQATSRL 444
GYG + + T RG G T QAT RL
Sbjct: 574 GYGGPKQEADTKNMRGKGKKTAQATKRL 601
>03_06_0239 -
32578231-32578353,32578431-32578655,32579081-32579248,
32579331-32579446,32579540-32579692,32579779-32579922,
32580775-32581576
Length = 576
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +3
Query: 273 EESKRRLGIIVDKIDTDNDGFVTLVELKDWIRYTQKRYIDDDVERHWKQHNPSNEPSIPW 452
EE L + +DTDN G +TL ELK ++ +D +++ + + N +I +
Sbjct: 413 EEEIAGLKEMFKMLDTDNSGHITLEELKTGLQRVGANLMDSEIDALMEAADIDNSGTIDY 472
>01_01_0226 - 1930276-1930821
Length = 181
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +3
Query: 267 PPEESK--RRLGIIVDKIDTDNDGFVTLVE 350
PP ES R + +++++DTD DGFV L E
Sbjct: 58 PPSESAGGREVAAMMNELDTDRDGFVDLGE 87
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 138 PEETKRMMDHLSDAEHYRNEHHNKQFDH 221
P + + DH S H+R+ HH +Q H
Sbjct: 123 PRDHRDQHDHQSQRHHHRHHHHQRQRHH 150
>03_05_0739 + 27271404-27271988,27272265-27272411
Length = 243
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 312 IDTDNDGFVTLVELKDWIRYTQKRYIDDDVE 404
+DTDN+G VTL ELKD + + + ++E
Sbjct: 60 MDTDNNGRVTLQELKDGLTKVGSKLAEPEME 90
>02_02_0103 +
6797830-6798433,6799412-6799480,6799573-6799664,
6799968-6800002,6800306-6800470,6800561-6800657,
6800915-6801031
Length = 392
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 141 EETKRMMDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTF--DQLPPEE--SKRRLGIIVD 308
EE + SDA ++ H D+D L D+ K + PPE +K++ ++
Sbjct: 295 EEASTDDSNASDAPARKSFTH-LDLDNDGLLSADELKPIIGNLHPPEHFYAKQQADYVIT 353
Query: 309 KIDTDNDGFVTLVEL 353
+ DT+ DG ++L E+
Sbjct: 354 QADTNKDGQLSLQEM 368
>09_04_0727 +
19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 282 KRRLGIIVDKIDTDNDGFVTLVELKDWIRYTQKRYIDDDVERHWKQHNPSNEPSIP 449
KRR+ + ++ DTD+ ++ R + K +DD+V K+ SN SIP
Sbjct: 103 KRRMSVNLEDYDTDSSSMEDDDLMRPRYR-SSKNKVDDEVSARPKRKKLSNSSSIP 157
>07_03_0917 -
22574472-22574558,22574756-22574821,22574848-22574886,
22574978-22575026,22575492-22575559,22575650-22575695,
22575773-22575866,22575956-22576018,22576436-22576558,
22577143-22577176,22577489-22577551,22577678-22577785,
22577914-22577976,22578322-22578378
Length = 319
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 267 VIDQKFWPDLHPKMHHDRTAYCGAHSCSVQH 175
VI++K WP P +HHD T +H +Q+
Sbjct: 112 VIEEKNWPPFLPLIHHDITNEIPSHLQRMQY 142
>08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811
Length = 359
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 141 EETKRMMDHLSDAEHYRNEHHNKQFDHD 224
EE +R + H H+ +EH N Q+D +
Sbjct: 295 EEEQRQLGHHHHQHHHEHEHENHQWDEE 322
>07_01_0437 -
3322132-3322251,3322345-3322569,3322953-3323120,
3323207-3323322,3323394-3323546,3323655-3323798,
3324475-3325255
Length = 568
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 312 IDTDNDGFVTLVELKDWIRYTQKRYIDDDVERHWKQHNPSNEPSIPW 452
+DTDN G +TL ELK +R D ++ + + N SI +
Sbjct: 419 LDTDNSGQITLEELKTGLRRVGANLKDSEITTLMEAADIDNSGSIDY 465
>01_07_0258 -
42350630-42350716,42351031-42351081,42351166-42351198,
42351338-42351430,42351547-42351639,42351717-42351812,
42351911-42351967,42352047-42352148,42352317-42352502,
42352650-42352916
Length = 354
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 300 IVDKIDTDNDGFVTLVELKDWIRYTQKRY--IDDDVERHWKQHNPSNEPS 443
+ + +D D D LV Y+ + + +DDD + HW +HN + S
Sbjct: 25 VQELLDMDKDAVSELVSDHFHQLYSLQNHLDVDDDDDDHWSEHNEQEDRS 74
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 333 TRRCPYRFCRLLFQVFSYSLPEVIDQKFWPDLHPKMHHD 217
TR Y+ C F+ FS LPEV F+ +H K H D
Sbjct: 113 TRELAYQICHE-FERFSKYLPEVKVAVFYGGVHIKKHKD 150
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 333 TRRCPYRFCRLLFQVFSYSLPEVIDQKFWPDLHPKMHHD 217
TR Y+ C F+ FS LPEV F+ +H K H D
Sbjct: 100 TRELAYQICHE-FERFSKYLPEVKVAVFYGGVHIKKHKD 137
>01_06_1502 +
37807954-37808050,37808161-37808378,37808482-37809011,
37809107-37809875
Length = 537
Score = 28.3 bits (60), Expect = 5.4
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = -2
Query: 586 GYGMKICARLYGENVARISS*SVVLLNTTPVTRPIFSVW*NQL-TSQGIDGSLLGLCCFQ 410
GYG+ A Y E+ + V L TT V PIF + Q +DG+LL +
Sbjct: 200 GYGISNTALSYVEDSVSCTVGFAVCLATTAVYLPIFLLGTRAYRAEQPVDGALLA----R 255
Query: 409 CLSTSSSMYRF*VYRIQSFSSTSVT 335
TSSS R R+ TS T
Sbjct: 256 LAKTSSSAARAWTARVFRRKDTSCT 280
>07_03_0539 -
19237573-19239169,19239258-19239410,19239505-19239566,
19239855-19240103,19240248-19240337,19240453-19240632,
19240713-19240942,19241558-19241735,19242327-19242432,
19242786-19242883,19243683-19243813,19243908-19244087,
19244179-19244443,19244557-19244627,19244707-19244922,
19245147-19245294
Length = 1317
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +3
Query: 141 EETKRMMDHLSDAEHYRNEHHNKQFDHD--AFLGEDQA--KTFDQLPPEESKR 287
EE + MD+ +D Y E HN FD D +L +D + K QLP +++
Sbjct: 356 EEMMQEMDYNADRAWYDCEEHNTMFDGDNSMYLEDDSSYKKREAQLPKRLTRK 408
>02_02_0348 -
9233032-9233154,9233233-9233311,9233387-9233511,
9233597-9233734,9233802-9233993,9235269-9237209
Length = 865
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 315 DTDNDGFVTLVELKDWIRYTQKRYIDDDVERHWKQHNPSNEPSIPWDV 458
D D D T+ ++ +I+Y + ++D+VE WK +N P P V
Sbjct: 749 DKDKDLNNTIKGIEKFIQYAR---LEDEVENKWKNTKITNWPFCPMKV 793
>06_01_0075 + 615415-616061,616144-616295,616829-617865
Length = 611
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 483 IGRVTGVVFNKTTD*EDMRATFSPYKRAHIFIPY 584
+G+VT + D M A + P+ R+H F PY
Sbjct: 405 LGKVTSFCIKYSIDIPAMDAKYVPHGRSHRFYPY 438
>04_04_0786 -
28052981-28053040,28053123-28053222,28053447-28053574,
28053654-28053821,28053901-28054013,28054135-28054287,
28054385-28054528,28054794-28055529
Length = 533
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 258 DQLPPEESKRRLGIIVDKIDTDNDGFVTLVELKDWIRYTQKRYIDDDVER 407
+ L PEE K L + + +DTD G +T+ ELK + R + +V++
Sbjct: 386 ENLSPEEIKG-LKQMFNNMDTDRSGTITVEELKVGLTKLGSRISEAEVQK 434
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,079,233
Number of Sequences: 37544
Number of extensions: 351710
Number of successful extensions: 1145
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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