Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M07
(635 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23016| Best HMM Match : efhand (HMM E-Value=3e-12) 109 1e-24
SB_52118| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23) 87 9e-18
SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_8971| Best HMM Match : efhand (HMM E-Value=2.3e-11) 82 4e-16
SB_30673| Best HMM Match : efhand (HMM E-Value=0.00017) 78 5e-15
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_27337| Best HMM Match : efhand (HMM E-Value=2.9e-21) 33 0.19
SB_59297| Best HMM Match : zf-DNL (HMM E-Value=0.68) 33 0.26
SB_24404| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03) 30 1.4
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 30 1.4
SB_12596| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_17503| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055) 29 3.2
SB_38997| Best HMM Match : ResIII (HMM E-Value=0.0025) 28 5.5
SB_4546| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_19074| Best HMM Match : efhand (HMM E-Value=2.5e-06) 28 5.5
SB_16781| Best HMM Match : RRS1 (HMM E-Value=1.6) 28 7.3
SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31) 27 9.7
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_23016| Best HMM Match : efhand (HMM E-Value=3e-12)
Length = 387
Score = 109 bits (263), Expect = 1e-24
Identities = 52/97 (53%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Frame = +3
Query: 132 PSPEETKRMMD-HLSDAEHYRN--EHHNKQFDHDAFLGEDQAKTFDQLPPEESKRRLGII 302
P ++ R+ D +S+ EH+R + HN ++DH+AFLG D+ KTFDQL PEESK RLG +
Sbjct: 19 PQDKKKTRVFDGKVSEEEHFRGTEQEHNTEYDHEAFLG-DEKKTFDQLSPEESKERLGKL 77
Query: 303 VDKIDTDNDGFVTLVELKDWIRYTQKRYIDDDVERHW 413
VDKID D+DG VT ELK WI+ + KRY+ +DV+R W
Sbjct: 78 VDKIDVDHDGKVTEEELKQWIKKSAKRYVYEDVDRQW 114
>SB_52118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 104 bits (250), Expect = 5e-23
Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Frame = +3
Query: 168 LSDAEHY-RNEHHNKQFDHDAFLGEDQAKTFDQLPPEESKRRLGIIVDKIDTDNDGFVTL 344
+SD EH+ + HN ++DHDAFLG+D+ K FD L P+ESKRRLG+IVD+ID D DG +T
Sbjct: 29 VSDKEHFSKTGVHNPEYDHDAFLGQDK-KEFDSLTPQESKRRLGLIVDRIDKDQDGRITY 87
Query: 345 VELKDWIRYTQKRYIDDDVERHWK 416
E+K+WI Y RY DD +R WK
Sbjct: 88 TEMKEWINYAGNRYAFDDGDRLWK 111
>SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23)
Length = 308
Score = 87.4 bits (207), Expect = 9e-18
Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = +3
Query: 135 SPEETKRMMDHLSDAEHYRNE-HHNKQFDHDAFLGEDQAKTFDQLPPEESKRRLGIIVDK 311
S + K D LS+AEH+ E HN +DH+AFLG ++ + FD LPPEE+K+RL ++ +
Sbjct: 21 SDKRPKTHTDKLSEAEHFDKEGEHNPDYDHEAFLGTEKEE-FDHLPPEEAKKRLRALIRE 79
Query: 312 IDTDNDGFVTLVELKDWIRYTQKRYIDDDVERHWKQHNPSNEPSIPWD 455
+D + DG VT EL DW++ K+ + V+ K+ + + + + W+
Sbjct: 80 VDNNKDGAVTTEELTDWVKGVFKKRSMEGVDNDLKEKDANEDGKVDWN 127
>SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 85.8 bits (203), Expect = 3e-17
Identities = 36/98 (36%), Positives = 59/98 (60%)
Frame = +3
Query: 162 DHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTFDQLPPEESKRRLGIIVDKIDTDNDGFVT 341
D S+ +H+ H+ ++DHDAFLGEDQA FD+L P+++K+RL + KID D D ++
Sbjct: 38 DSFSEQDHFPGGEHSSKYDHDAFLGEDQAAEFDELTPKQTKQRLRELFPKIDVDQDQKIS 97
Query: 342 LVELKDWIRYTQKRYIDDDVERHWKQHNPSNEPSIPWD 455
L EL +WI K++ E +Q + + + + W+
Sbjct: 98 LKELVEWIDVNMKKHTRKSSESRMEQMDKNKDGKVSWE 135
>SB_8971| Best HMM Match : efhand (HMM E-Value=2.3e-11)
Length = 234
Score = 81.8 bits (193), Expect = 4e-16
Identities = 41/100 (41%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = +3
Query: 162 DHLSDAEHYRNEH-HNKQFDHDAFLGEDQAKTFDQLPPEESKRRLGIIVD-KIDTDNDGF 335
D+L + +HY + H H+ ++DHDAFLG +A ++ PPEESK++L IIV+ KID + DG
Sbjct: 26 DNLYNHDHYTDSHLHDVRYDHDAFLG-PEADKWENFPPEESKQKLKIIVETKIDVNKDGK 84
Query: 336 VTLVELKDWIRYTQKRYIDDDVERHWKQHNPSNEPSIPWD 455
V+L EL+ WI +K ++ + VE + K+ + + I W+
Sbjct: 85 VSLQELEVWIDKQRKAFMYEAVEENIKKEDKDGDGKISWE 124
>SB_30673| Best HMM Match : efhand (HMM E-Value=0.00017)
Length = 256
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/85 (41%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 201 HNKQFDHDAFLGEDQAKTFDQLPPEESKRRLGIIVDKIDTDNDGFVTLVELKDWIRYTQK 380
H+ DH AFLGE+ AK F+ L PEE++RRL ++V +ID + DGFV EL+ WIR+ K
Sbjct: 2 HSAHDDHVAFLGEEMAKEFENLSPEEARRRLRMLVPRIDINKDGFVEEAELEIWIRHKMK 61
Query: 381 RY-IDDDVERHWKQHNPSNEPSIPW 452
++ +++DV+ ++ + +N+ W
Sbjct: 62 KWEVEEDVDAIFRDMDFNNDNHATW 86
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +3
Query: 240 DQAKTFDQLPPEESKRRLGIIV-DKIDTDNDGFVTLVELKDWIRYTQKRYIDDDVERHWK 416
D K F L EE+K++L +V ++D D DGFVT EL+ + T +++ +V
Sbjct: 542 DHHKDFKGLSAEETKQKLEQLVKSEVDLDKDGFVTEDELRLRLLNTSRKHRKTEVNSTVT 601
Query: 417 QHNPSNEPSIPWD---VS*FYHTE 479
H+ + + + W+ + F HTE
Sbjct: 602 FHDDNKDGKVSWEEFKKAHFTHTE 625
>SB_27337| Best HMM Match : efhand (HMM E-Value=2.9e-21)
Length = 172
Score = 33.1 bits (72), Expect = 0.19
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +3
Query: 210 QFDHDAFLGEDQAKTFDQLPPEESKRRLGIIVD---KIDTDNDGFVTLVELKDWIRYTQ- 377
QFD D D + + P SK R+ II+ K+DT DG +T+ +LK Q
Sbjct: 82 QFDKDGSGSLDFEEFLRAVRPSMSKNRVEIIMKAFHKMDTTGDGVITIADLKKVYNARQD 141
Query: 378 KRY 386
KRY
Sbjct: 142 KRY 144
>SB_59297| Best HMM Match : zf-DNL (HMM E-Value=0.68)
Length = 629
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 213 FDHDAFLGEDQAKTFDQLPPEESKRRLGIIVD 308
F HDA +GE + +TF+ P SK++L + +D
Sbjct: 10 FVHDADVGEQEDQTFENRPKSASKKKLSVNMD 41
>SB_24404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/69 (21%), Positives = 36/69 (52%)
Frame = +3
Query: 219 HDAFLGEDQAKTFDQLPPEESKRRLGIIVDKIDTDNDGFVTLVELKDWIRYTQKRYIDDD 398
HDA +D F + + K+R+ + + D ++D + +++D R+T ++ID+
Sbjct: 34 HDA-CEDDMESNFSHMSEGDFKQRMSELAEISDDEDDKKADMAKIRDRSRHTWSQFIDEM 92
Query: 399 VERHWKQHN 425
+K+++
Sbjct: 93 KTLEYKEYH 101
>SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 260 SITSGRE*EKTWNNSRQNRYGQRRVRDASRTKR-LDTVHSETIHRR*RREALEATQPKQR 436
S + G+ EK +NN++ N+Y ++R R+ + KR D + + R E LE K +
Sbjct: 141 SSSRGKRTEKHFNNNKDNKYWEKRQRNNASAKRSRDARRVRELECQIRAEFLEEENHKYK 200
Query: 437 AV 442
++
Sbjct: 201 SL 202
>SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03)
Length = 307
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/93 (19%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +3
Query: 150 KRMMDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTFDQLPP-EESKRRLGIIVDKIDTDN 326
K D+L+ + E +K+ ++ + + + Q +E K L D+I D
Sbjct: 156 KETSDYLASLRQLKQELKDKELKYEKDMESLRVRCKKQACSIKELKSELLKAQDQIHIDR 215
Query: 327 DGFVTLVELKDWIRYTQKRYIDDDVERHWKQHN 425
GF ++ ++++Y + ++ ++ KQH+
Sbjct: 216 SGFEDIIRKNEFVKYQEIEKLEQTLKNCKKQHS 248
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 312 IDTDNDGFVTLVELKDWIRYTQKRYIDDDVER 407
+D D DGF+T +LK ++ + DDD++R
Sbjct: 82 MDKDGDGFITFGDLKKTMQECDENLSDDDLKR 113
>SB_12596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 547 FLHTNEHIFSYHIHHRHVLHLSINLL 624
F HT +F H HH H + ++ N++
Sbjct: 13 FTHTTTTVFQLHHHHHHTITITTNII 38
>SB_17503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -2
Query: 112 ETAKATNRDLSILTSCKVPRQQNHVNFLIPENRERKR 2
E K TNR ++ + +PR +N V++++ E ER+R
Sbjct: 65 EAIKLTNRRVNAIEHVIIPRIENTVSYILGELDERER 101
>SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055)
Length = 685
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = -3
Query: 351 VRLASRTRRCPYRFC--RLLFQVFSYSLPEVIDQKF---WPDLHPKMHHDRTA 208
VR ++TR+C YR R Q + Y+ ++ +K+ PD H +H R A
Sbjct: 443 VRTRTKTRKCTYRQANTRSRTQTYKYTCTQIDTRKYTYTHPDTHMHVHAPRHA 495
>SB_38997| Best HMM Match : ResIII (HMM E-Value=0.0025)
Length = 698
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 342 LVELKDWIRYTQKRYIDDDVERHWKQHNPSNEPSIPWDV 458
L++ KD +R +Q + VE + P PS+PWD+
Sbjct: 480 LIQYKDGVRRSQ--CVATHVEADSSRRRPPGVPSLPWDL 516
>SB_4546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 358 TGYGTLRNDTSTMTSRGTGSNTTQATS 438
TG GTL+ T T+ SR TGS A S
Sbjct: 382 TGTGTLKTGTGTVKSRSTGSIPGDADS 408
>SB_19074| Best HMM Match : efhand (HMM E-Value=2.5e-06)
Length = 209
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 300 IVDKIDTDNDGFVTLVELKDWIRYTQKRYIDDDVERHWKQHNPSNEPSIPWD 455
I+ KIDT+ D +T ELKD I+ + ++ ++ + ++ + + + WD
Sbjct: 93 ILRKIDTNKDRKITEQELKDHIKTMIDARLAEEGKKLMELYDNNMDGGVTWD 144
>SB_16781| Best HMM Match : RRS1 (HMM E-Value=1.6)
Length = 295
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 358 TGYGTLRNDTSTMTSRGTGSNTTQATSRLSPGM*VDFTTQR--I*AGSLVS 504
TG RN T + + GTGSN T S + V+ TT+R + GSL S
Sbjct: 227 TGPSACRNTTDS-SGTGTGSNKTTENSASEEQLPVETTTEREAVPQGSLES 276
>SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31)
Length = 156
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 207 KQFDHDAFLGEDQAKTFDQLPPEE-SKRRLGIIVDKIDTDNDGFVTLVELKDWIRY 371
K++D DA G + F QL E +K + + K+D D +G ++ E W+ +
Sbjct: 101 KKYDKDAS-GSIDREEFKQLMHETGNKVNIDKALKKLDKDGNGQISFTEFLAWLNW 155
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +3
Query: 258 DQLPPEESKRRLGIIVDKIDTDNDGFVTLVELKDWIRYTQKRYIDDDVE 404
+Q P+E ++ L D+D+ G++ EL+D + +K+ +D+++
Sbjct: 212 NQKKPDEEEQDLINAFHVFDSDDKGYIEASELRDLLCGMEKKIPEDELQ 260
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,937,336
Number of Sequences: 59808
Number of extensions: 422553
Number of successful extensions: 1411
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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