Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M05
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.1  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   2.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.4  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 391 TSNRQLISNSRNMSVCEGSSVAVDI 317
           T+NR +   S  + VCEG  V +D+
Sbjct: 166 TANRMIPGPS--IQVCEGDKVVIDV 188


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 391 TSNRQLISNSRNMSVCEGSSVAVDI 317
           T+NR +   S  + VCEG  V +D+
Sbjct: 166 TANRMIPGPS--IQVCEGDKVVIDV 188


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +3

Query: 411 TTTMIYPRRRSRPEICPPFPIYH-QPTLF 494
           +T    P      E+ PPF  YH +P LF
Sbjct: 6   STEKFLPTVLPHQEVPPPFGYYHEEPPLF 34


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 438 RSRPEICPPFPIYHQPTLF 494
           R R +  PP    HQP LF
Sbjct: 216 RLRRDTAPPQWYQHQPLLF 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,789
Number of Sequences: 336
Number of extensions: 2388
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)