SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M04
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017594-1|AAH17594.1|  242|Homo sapiens APAF1 interacting prote...   164   1e-40
BC009077-1|AAH09077.1|  242|Homo sapiens APAF1 interacting prote...   163   2e-40
AF132963-1|AAD27738.1|  242|Homo sapiens CGI-29 protein protein.      163   2e-40
BC008440-1|AAH08440.1|  242|Homo sapiens APAF1 interacting prote...   160   2e-39
BC010133-1|AAH10133.1|  204|Homo sapiens Unknown (protein for MG...    97   4e-20
U66469-1|AAC50897.1|  332|Homo sapiens cell growth regulator CGR...    29   9.1  
BC015063-1|AAH15063.1|  332|Homo sapiens cell growth regulator w...    29   9.1  

>BC017594-1|AAH17594.1|  242|Homo sapiens APAF1 interacting protein
           protein.
          Length = 242

 Score =  164 bits (399), Expect = 1e-40
 Identities = 78/117 (66%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
 Frame = +3

Query: 144 EHPRNLIPELCKQFYHLGWVTGTGGGISIKEGDRIYIAPSGVQKERMKSDDLFVQTIHDV 323
           EHPR LIPELCKQFYHLGWVTGTGGGIS+K GD IYIAPSGVQKER++ +D+FV  I++ 
Sbjct: 22  EHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVYDINEK 81

Query: 324 DXXXXXXXXXXXXSQCTPLFMLAYIMRNAGSVIHTHSPHAVRCTLLY-DKEFVITHQ 491
           D            SQCTPLFM AY MR AG+VIHTHS  AV  TLL+  +EF ITHQ
Sbjct: 82  DISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQ 138


>BC009077-1|AAH09077.1|  242|Homo sapiens APAF1 interacting protein
           protein.
          Length = 242

 Score =  163 bits (397), Expect = 2e-40
 Identities = 78/117 (66%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
 Frame = +3

Query: 144 EHPRNLIPELCKQFYHLGWVTGTGGGISIKEGDRIYIAPSGVQKERMKSDDLFVQTIHDV 323
           EHPR LIPELCKQFYHLGWVTGTGGGIS+K GD IYIAPSGVQKER++ +D+FV  I++ 
Sbjct: 22  EHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINEK 81

Query: 324 DXXXXXXXXXXXXSQCTPLFMLAYIMRNAGSVIHTHSPHAVRCTLLY-DKEFVITHQ 491
           D            SQCTPLFM AY MR AG+VIHTHS  AV  TLL+  +EF ITHQ
Sbjct: 82  DISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQ 138


>AF132963-1|AAD27738.1|  242|Homo sapiens CGI-29 protein protein.
          Length = 242

 Score =  163 bits (397), Expect = 2e-40
 Identities = 78/117 (66%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
 Frame = +3

Query: 144 EHPRNLIPELCKQFYHLGWVTGTGGGISIKEGDRIYIAPSGVQKERMKSDDLFVQTIHDV 323
           EHPR LIPELCKQFYHLGWVTGTGGGIS+K GD IYIAPSGVQKER++ +D+FV  I++ 
Sbjct: 22  EHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINEK 81

Query: 324 DXXXXXXXXXXXXSQCTPLFMLAYIMRNAGSVIHTHSPHAVRCTLLY-DKEFVITHQ 491
           D            SQCTPLFM AY MR AG+VIHTHS  AV  TLL+  +EF ITHQ
Sbjct: 82  DISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQ 138


>BC008440-1|AAH08440.1|  242|Homo sapiens APAF1 interacting protein
           protein.
          Length = 242

 Score =  160 bits (389), Expect = 2e-39
 Identities = 77/117 (65%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
 Frame = +3

Query: 144 EHPRNLIPELCKQFYHLGWVTGTGGGISIKEGDRIYIAPSGVQKERMKSDDLFVQTIHDV 323
           E PR LIPELCKQFYHLGWVTGTGGGIS+K GD IYIAPSGVQKER++ +D+FV  I++ 
Sbjct: 22  ERPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINEK 81

Query: 324 DXXXXXXXXXXXXSQCTPLFMLAYIMRNAGSVIHTHSPHAVRCTLLY-DKEFVITHQ 491
           D            SQCTPLFM AY MR AG+VIHTHS  AV  TLL+  +EF ITHQ
Sbjct: 82  DISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQ 138


>BC010133-1|AAH10133.1|  204|Homo sapiens Unknown (protein for
           MGC:19822) protein.
          Length = 204

 Score = 96.7 bits (230), Expect = 4e-20
 Identities = 49/85 (57%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
 Frame = +3

Query: 240 DRIYIAPSGVQKERMKSDDLFVQTIHDVDXXXXXXXXXXXXSQCTPLFMLAYIMRNAGSV 419
           D IYIAPSGVQKER++ +D+FV  I++ D            SQCTPLFM AY MR AG+V
Sbjct: 16  DEIYIAPSGVQKERIQPEDMFVCDINEKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAV 75

Query: 420 IHTHSPHAVRCTLLY-DKEFVITHQ 491
           IHTHS  AV  TLL+  +EF ITHQ
Sbjct: 76  IHTHSKAAVMATLLFPGREFKITHQ 100


>U66469-1|AAC50897.1|  332|Homo sapiens cell growth regulator CGR19
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +2

Query: 368 MYSAIHA--RLYHEECRIRYTHTLSARGQMH 454
           M S IH   R Y   CRI Y + L A+GQ H
Sbjct: 193 MVSVIHIPDRTYKLSCRILYQYLLLAQGQFH 223


>BC015063-1|AAH15063.1|  332|Homo sapiens cell growth regulator with
           ring finger domain 1 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +2

Query: 368 MYSAIHA--RLYHEECRIRYTHTLSARGQMH 454
           M S IH   R Y   CRI Y + L A+GQ H
Sbjct: 193 MVSVIHIPDRTYKLSCRILYQYLLLAQGQFH 223


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,600,270
Number of Sequences: 237096
Number of extensions: 1367626
Number of successful extensions: 6337
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6337
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -