Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M03
(552 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 110 8e-25
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 102 2e-22
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 101 3e-22
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 92 2e-19
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 72 3e-13
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 58 4e-09
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 58 6e-09
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 51 7e-07
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 40 0.002
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 35 0.038
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 35 0.050
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 34 0.066
01_05_0543 + 23093519-23093624,23093912-23093934 33 0.15
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 32 0.26
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 31 0.61
07_03_0806 + 21654057-21655154,21655728-21655796,21656110-216562... 29 1.9
06_01_0272 + 2016836-2017963 29 3.3
10_01_0169 - 1899491-1899666,1901358-1901638,1902468-1902477,190... 27 7.5
09_06_0212 + 21606245-21606401,21606505-21606782,21608330-21608551 27 10.0
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 110 bits (264), Expect = 8e-25
Identities = 61/144 (42%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
Frame = +3
Query: 3 DIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSE 182
+I+YTKLFIN +VDA S KTF T +P+ VI +VAEG F + E
Sbjct: 42 EIRYTKLFINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAFD-HGE 100
Query: 183 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYYAGK 359
W + S+RG ++ K A ++ER A LA LE+LD GKP+ A +V GI+RY+AG
Sbjct: 101 WPRMSGSERGRVMAKYAEVVERHADELAALESLDAGKPLAAARAVDVGECVGILRYFAGA 160
Query: 360 ADKILGNTIPADGEVLTFTLKEPV 431
ADKI G T+ ++ +TL+EP+
Sbjct: 161 ADKIHGETLKMSRQLQGYTLREPL 184
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
V G I+PWN+P MF ++PALAAGCTVVVKPAEQTPL
Sbjct: 186 VAGLIVPWNFPAIMFFSKVSPALAAGCTVVVKPAEQTPL 224
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 102 bits (244), Expect = 2e-22
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Frame = +3
Query: 6 IKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEW 185
+ YT+L I+ ++VD+ S KTFPT++P+ +I VAEG F W
Sbjct: 66 VNYTQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAFDE-GPW 124
Query: 186 RLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYYAGKA 362
+ A +R +L + A L+E+ +A LET DNGKP QA EV + ++RYYAG A
Sbjct: 125 PKMTAYERSRILLRFADLIEKHNDEIAALETWDNGKPYAQAANIEVPMVARLMRYYAGWA 184
Query: 363 DKILGNTIPADGEVLTFTLKEPVVFAAK 446
DKI G +PADG L EP+ A +
Sbjct: 185 DKIHGLVVPADGPHHVQVLHEPIGVAGQ 212
Score = 63.7 bits (148), Expect = 9e-11
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
V GQI+PWN+P+ MF W + PALA G TVV+K AEQTPL
Sbjct: 209 VAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPL 247
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 101 bits (243), Expect = 3e-22
Identities = 59/149 (39%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Frame = +3
Query: 3 DIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSE 182
D+KYTKL IN +VDA S KTF T++P+ VI +VAEG F
Sbjct: 69 DVKYTKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDE-GP 127
Query: 183 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAE-QEVLWASGIVRYYAGK 359
W + A +R +L + A L+E+ A +A LET D GK ++Q EV + +RYY G
Sbjct: 128 WPRMTAYERCRVLLRFADLIEQHADEIAALETWDGGKTLEQTTGTEVPMVARYMRYYGGW 187
Query: 360 ADKILGNTIPADGEVLTFTLKEPVVFAAK 446
ADKI G +PADG L EP+ A +
Sbjct: 188 ADKIHGLVVPADGPHHVQVLHEPIGVAGQ 216
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
V GQI+PWN+P+ MF W + PALA G VV+K AEQTPL
Sbjct: 213 VAGQIIPWNFPLLMFAWKVGPALACGNAVVLKTAEQTPL 251
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 92.3 bits (219), Expect = 2e-19
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
Frame = +3
Query: 3 DIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSE 182
+IK+TKLFIN E+VDA S KTF T +P+ V+ +AE F + +
Sbjct: 23 EIKFTKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAF-EHGK 81
Query: 183 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAE-QEVLWASGIVRYYAGK 359
W + +R ++ KLA L+E+ A LA L+ D GK + + ++ A+ ++RYYAG
Sbjct: 82 WPRMSGYERSRVMNKLADLVEQHADELAALDGADAGKLLTLGKIIDMPAAAQMMRYYAGA 141
Query: 360 ADKILGNTIPADGEVLTFTLKEPV 431
ADKI G ++ G+ +TL+EP+
Sbjct: 142 ADKIHGESLRVAGKYQGYTLREPI 165
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
V G I+PWN+P MF ++PALAAGCT+VVKPAEQTPL
Sbjct: 167 VVGVIIPWNFPTMMFFLKVSPALAAGCTIVVKPAEQTPL 205
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 72.1 bits (169), Expect = 3e-13
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = +3
Query: 60 KTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLDASQRGLLLFKLATL 239
KTF T +P+ VI ++AEG F + W + RG +L K A L
Sbjct: 34 KTFETRDPRTGEVIAKIAEGDKADIDLAVKAAREAFD-HGPWPRMSGFARGRILHKFADL 92
Query: 240 MERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYYAGKADKILGNTIPADGEVLTFT 416
+E+ + LA L+T+D GK + ++ + ++RYYAG ADK+ G T+ +T
Sbjct: 93 VEQHVEELAALDTVDAGKLFAMGKLVDIPGGANLLRYYAGAADKVHGETLKMARPCHGYT 152
Query: 417 LKEPV 431
LKEPV
Sbjct: 153 LKEPV 157
Score = 67.3 bits (157), Expect = 8e-12
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = +2
Query: 416 LKGTRRVCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
LK V G I+PWNYP MF + +PALAAGCT+VVKPAEQTPL
Sbjct: 153 LKEPVGVVGHIVPWNYPTTMFFFKASPALAAGCTMVVKPAEQTPL 197
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +2
Query: 416 LKGTRRVCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
LK V G I PWNYP+ M W +APALAAGCT V+KP+E L
Sbjct: 150 LKEPIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASL 194
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 7/144 (4%)
Frame = +3
Query: 21 LFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYS--EWRLL 194
LFI W + + P +NP E+ I + F R W
Sbjct: 12 LFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDGGRHWSRA 71
Query: 195 DASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKIL 374
+ R L +A ++ YLA LETLD+GKP+ +A ++ + YYA A+ +
Sbjct: 72 PGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPLDEAAGDMEDVAACFEYYADLAEALD 131
Query: 375 GN-----TIPADGEVLTFTLKEPV 431
G ++P + ++ LKEP+
Sbjct: 132 GKQRAPISLPME-NFESYVLKEPI 154
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 57.6 bits (133), Expect = 6e-09
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = +2
Query: 410 IYLKGTRRVCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
+ LK V G + PWN+P+ M + PALA GCTVVVKP+E TPL
Sbjct: 212 LVLKQPVGVVGAVTPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 258
Score = 52.4 bits (120), Expect = 2e-07
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +3
Query: 174 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYA 353
+ W L A++R L K L+ + LA L TL+ GKP+K+A EV + + + Y+A
Sbjct: 132 FYSWSKLTANERSKALRKWHDLIISHKEELALLMTLEQGKPMKEALVEVTYGASFIEYFA 191
Query: 354 GKADKILGNTIPAD-GEVLTFTLKEPV 431
+A +I G+ IP + LK+PV
Sbjct: 192 EEAKRIYGDIIPPTLSDRRLLVLKQPV 218
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 50.8 bits (116), Expect = 7e-07
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +3
Query: 6 IKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXF--HRYS 179
I +LF+ EW + P +NP ES I ++ G +R
Sbjct: 5 IPQRQLFVAGEWRAPALGRRLPVVNPATESPIGEIPAGTAEDVDAAVAAAREALKRNRGR 64
Query: 180 EWRLLDASQRGLLLFKLAT-LMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAG 356
+W + R L +A ++ER ++ LA LETLD GKP+ +A ++ +G Y+A
Sbjct: 65 DWARAPGAVRAKYLRAIAAKIIERKSE-LARLETLDCGKPLDEAAWDMDDVAGCFEYFAD 123
Query: 357 KADKI 371
A+ +
Sbjct: 124 LAESL 128
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2
Query: 458 NYPIPMFIWNIAPALAAGCTVVVKPAE 538
NYP+ M W +APALAAGCT V+KP+E
Sbjct: 183 NYPLLMATWKVAPALAAGCTAVLKPSE 209
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 1/139 (0%)
Frame = +3
Query: 18 KLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLD 197
+L I E+V++ + + NP + V+ ++ F WR
Sbjct: 25 RLLIGGEFVESRADEHVDVTNPATQEVVSRIPLTTADEFRAAVDAARTAF---PGWRNTP 81
Query: 198 ASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILG 377
+ R ++ K L+ + LAE T + GK +K A +V +V + G +G
Sbjct: 82 VTTRQRIMLKYQELIRANMDKLAENITTEQGKTLKDAWGDVFRGLEVVEHACGMGTLQMG 141
Query: 378 NTIP-ADGEVLTFTLKEPV 431
+ + TF+++EP+
Sbjct: 142 EYVSNVSNGIDTFSIREPL 160
Score = 36.7 bits (81), Expect = 0.012
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTP 547
VC I P+N+P + +W A+ G T V+KP+E+ P
Sbjct: 162 VCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDP 199
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 35.1 bits (77), Expect = 0.038
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 446 ILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTP 547
I WNYP + I I A+AAG VV+KP+E P
Sbjct: 96 ISAWNYPFLLSIDPIIGAIAAGNAVVLKPSEVAP 129
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 34.7 bits (76), Expect = 0.050
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 446 ILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQ 541
I P+NYP+ + + I PAL AG +V+KP Q
Sbjct: 168 IPPFNYPVNLAVSKIGPALIAGNALVLKPPTQ 199
Score = 33.9 bits (74), Expect = 0.087
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 183 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKA 362
W +R LL K A +++ +AE + KP K A EV+ + +V Y A +
Sbjct: 72 WARTPLWKRAELLHKAAAILKEHKTPIAECLVKEIAKPAKDAISEVVRSGDLVSYTAEEG 131
Query: 363 DKILG 377
+ILG
Sbjct: 132 VRILG 136
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 34.3 bits (75), Expect = 0.066
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 446 ILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTP 547
I WNYP + I + A+AAG VV+KP+E P
Sbjct: 125 ISAWNYPFLLSIDPVIGAIAAGNAVVLKPSEIAP 158
>01_05_0543 + 23093519-23093624,23093912-23093934
Length = 42
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 3 DIKYTKLFINNEWVDAVSKKT 65
+IK+TKLFIN +VDAVS +T
Sbjct: 18 EIKFTKLFINGRFVDAVSDET 38
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 32.3 bits (70), Expect = 0.26
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
V G I +N+P + WN AL G VV K A TPL
Sbjct: 183 VVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 221
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 31.1 bits (67), Expect = 0.61
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 455 WNYPIPMFIWNIAPALAAGCTVVVKPAEQTP 547
WN P+ + + + ALAAG V +KP+E P
Sbjct: 127 WNVPLGLSLEPLVGALAAGNAVALKPSELAP 157
>07_03_0806 +
21654057-21655154,21655728-21655796,21656110-21656274,
21656416-21656589,21659506-21659769,21659957-21660070
Length = 627
Score = 29.5 bits (63), Expect = 1.9
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +1
Query: 217 CSSNWPPSWRETQNI 261
CS +WPP+WR+ ++I
Sbjct: 511 CSCDWPPNWRDNKDI 525
>06_01_0272 + 2016836-2017963
Length = 375
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 312 QEVLWASGIVRYYAGKADKILGNTIPADGEVLTFTLKEPVVFAAKSYHGITQS-RCSYG 485
+ V AS +RYY + ++ G+T P E F + P A + H T + R +YG
Sbjct: 148 EAVRLASKRIRYYQAGSSEMFGSTPPPQSESSPFHPRSPYAAAKVAAHWYTVNYREAYG 206
>10_01_0169 -
1899491-1899666,1901358-1901638,1902468-1902477,
1902696-1902786,1903993-1904031,1904117-1904405,
1904488-1904658,1904737-1905623,1905711-1906157,
1906236-1906460,1906536-1906943
Length = 1007
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 419 KGTRRVCGQILPWNYPIPMFIW 484
+G R G +PWNY P + W
Sbjct: 244 RGRTRGVGSSVPWNYGFPDYAW 265
>09_06_0212 + 21606245-21606401,21606505-21606782,21608330-21608551
Length = 218
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 194 GCFTKRPTALQTGHPHGERRKIFSRTRNTGQRKTSEASRTRSLVGIR 334
GC T R T G+ R+I + R+ G +KT + R+ GIR
Sbjct: 77 GCRTNRATRAGYWKSTGKDRRINYQNRSIGMKKTLVYYKGRAPQGIR 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,327,586
Number of Sequences: 37544
Number of extensions: 309080
Number of successful extensions: 862
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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