Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M03
(552 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial (... 111 4e-25
At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identica... 110 5e-25
At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identic... 92 2e-19
At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase (S... 69 3e-12
At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putativ... 59 2e-09
At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putativ... 58 3e-09
At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phospha... 37 0.010
At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phospha... 37 0.010
At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogena... 37 0.010
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 33 0.096
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 33 0.096
At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar ... 33 0.17
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 33 0.17
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 32 0.29
At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative / anti... 32 0.29
At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative / anti... 32 0.29
At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putativ... 30 1.2
At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putativ... 30 1.2
At5g18470.1 68418.m02175 curculin-like (mannose-binding) lectin ... 29 2.1
At3g50300.1 68416.m05501 transferase family protein similar to a... 27 6.3
At3g60960.1 68416.m06821 pentatricopeptide (PPR) repeat-containi... 27 8.3
At2g28600.1 68415.m03476 expressed protein 27 8.3
>At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial
(ALDH3) nearly identical to mitochondrial aldehyde
dehydrogenase ALDH3 [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein
Length = 534
Score = 111 bits (266), Expect = 4e-25
Identities = 61/148 (41%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Frame = +3
Query: 6 IKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEW 185
+++T+L I +VDAVS KTFPT++P++ VI QV+EG F W
Sbjct: 51 VEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDE-GPW 109
Query: 186 RLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYYAGKA 362
+ A +R +LF+ A L+E+ +A LET DNGKP +Q+ Q EV + + RYYAG A
Sbjct: 110 PKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWA 169
Query: 363 DKILGNTIPADGEVLTFTLKEPVVFAAK 446
DKI G T+P DG TL EP+ A +
Sbjct: 170 DKIHGMTMPGDGPHHVQTLHEPIGVAGQ 197
Score = 60.5 bits (140), Expect = 7e-10
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
V GQI+PWN+P+ M W + PALA G TVV+K AEQTPL
Sbjct: 194 VAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPL 232
>At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identical
to aldehyde dehydrogenase [Arabidopsis thaliana]
GI:8574427; similar to mitochondrial aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; identical to cDNA aldehyde
dehydrogenase AtALDH2a GI:20530140
Length = 538
Score = 110 bits (265), Expect = 5e-25
Identities = 60/148 (40%), Positives = 83/148 (56%), Gaps = 1/148 (0%)
Frame = +3
Query: 6 IKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEW 185
+ +T+L IN +VD+ S KTFPT++P+ VI VAEG F W
Sbjct: 55 VSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDE-GPW 113
Query: 186 RLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQA-EQEVLWASGIVRYYAGKA 362
+ A +R +L + A L+E+ ++ LA LET DNGKP +Q+ E+ + + RYYAG A
Sbjct: 114 PKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWA 173
Query: 363 DKILGNTIPADGEVLTFTLKEPVVFAAK 446
DKI G TIPADG TL EP+ A +
Sbjct: 174 DKIHGLTIPADGNYQVHTLHEPIGVAGQ 201
Score = 63.3 bits (147), Expect = 1e-10
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
V GQI+PWN+P+ MF W + PALA G T+V+K AEQTPL
Sbjct: 198 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 236
>At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identical
to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana]
gi|20530143|gb|AAM27004
Length = 501
Score = 92.3 bits (219), Expect = 2e-19
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Frame = +3
Query: 3 DIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSE 182
+IK+TKLFIN +++DA S KTF TI+P++ VI +AEG F +
Sbjct: 16 EIKFTKLFINGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVDLAVNAARYAFD-HGP 74
Query: 183 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAE-QEVLWASGIVRYYAGK 359
W + +R L+ K A L+E + + LA+L+ +D GK + + ++ +G RY AG
Sbjct: 75 WPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGA 134
Query: 360 ADKILGNTIPADGEVL-TFTLKEPV 431
ADKI G T+ + L +TLKEP+
Sbjct: 135 ADKIHGETLKMTRQSLFGYTLKEPI 159
Score = 62.1 bits (144), Expect = 2e-10
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +2
Query: 416 LKGTRRVCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
LK V G I+PWN+P MF +APA+AAGCT+VVKPAEQT L
Sbjct: 155 LKEPIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSL 199
>At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase
(SSADH1) similar to succinate-semialdehyde dehydrogenase
[NADP+] (SSDH) [Escherichia coli] SWISS-PROT:P25526;
identical to succinic semialdehyde dehydrogenase mRNA,
nuclear gene encoding mitochondrial protein GI:6684441;
contains TIGRfam profile TIGR01780:succinic semialdehyde
dehydrogenase; contains Pfam profile PF00171: aldehyde
dehydrogenase (NAD) family protein
Length = 528
Score = 68.5 bits (160), Expect = 3e-12
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Frame = +3
Query: 15 TKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLL 194
T+ I +W+D+ KT NP +I VA + ++ W L
Sbjct: 53 TQGLIGGKWLDSYDNKTIKVNNPATGEIIADVA---CMGTKETNDAIASSYEAFTSWSRL 109
Query: 195 DASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKIL 374
A +R +L + L+ + L +L TL+ GKP+K+A EV + + + YYA +A ++
Sbjct: 110 TAGERSKVLRRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVY 169
Query: 375 GNTIPAD-GEVLTFTLKEPV 431
G+ IP + + LK+PV
Sbjct: 170 GDIIPPNLSDRRLLVLKQPV 189
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2
Query: 410 IYLKGTRRVCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
+ LK V G I PWN+P+ M + PALA+GCTVVVKP+E TPL
Sbjct: 183 LVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPL 229
>At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795
Length = 503
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +2
Query: 416 LKGTRRVCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
LK V G I PWNYP+ M +W +AP+LAAGCT ++KP+E L
Sbjct: 148 LKEPIGVVGMITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASL 192
Score = 56.4 bits (130), Expect = 1e-08
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Frame = +3
Query: 18 KLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYS--EWRL 191
+LFI +W + V +KT P +NP E +I + F R + +W
Sbjct: 9 QLFIGGQWTEPVLRKTLPVVNPATEDIIGYIPAATSEDVELAVEAARKAFTRNNGKDWAR 68
Query: 192 LDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKI 371
+ R L +A + LA LE +D GKP+ +A ++ +G YYA A+ +
Sbjct: 69 ATGAVRAKYLRAIAAKVIERKSELANLEAIDCGKPLDEAAWDMDDVAGCFEYYADLAEGL 128
Query: 372 LGN-----TIPADGEVLTFTLKEPV 431
++P D + LKEP+
Sbjct: 129 DAKQKTPLSLPMD-TFKGYILKEPI 152
>At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putative
identical to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795; strong similarity to betaine aldehyde
dehydrogenase [Amaranthus hypochondriacus] GI:2388710
Length = 501
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 416 LKGTRRVCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAE 538
LK V G I PWNYP+ M +W +AP+LAAGCT ++KP+E
Sbjct: 148 LKQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKPSE 188
Score = 52.4 bits (120), Expect = 2e-07
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Frame = +3
Query: 18 KLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRY--SEWRL 191
+LFI+ EW + + KK P +NP E VI + R +W
Sbjct: 9 QLFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAK 68
Query: 192 LDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKAD 365
+ R L +A + LA+LE LD GKP+ +A ++ +G +YA A+
Sbjct: 69 APGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEFYADLAE 126
>At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 446 ILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQ 541
I P+NYP+ + + IAPAL AG ++V+KP Q
Sbjct: 165 IPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 196
Score = 34.3 bits (75), Expect = 0.055
Identities = 26/120 (21%), Positives = 46/120 (38%)
Frame = +3
Query: 18 KLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLD 197
K + + EW + S K+ +NP +V W
Sbjct: 17 KYYADGEWKTSSSGKSVAIMNPATRKTQYKVQACTQEEVNAVMELAKSA---QKSWAKTP 73
Query: 198 ASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILG 377
+R LL K A +++ + +AE + KP K + EV+ + ++ Y A + +ILG
Sbjct: 74 LWKRAELLHKAAAILKDNKAPMAESLVKEIAKPAKDSVTEVVRSGDLISYCAEEGVRILG 133
>At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 446 ILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQ 541
I P+NYP+ + + IAPAL AG ++V+KP Q
Sbjct: 165 IPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 196
Score = 34.3 bits (75), Expect = 0.055
Identities = 26/120 (21%), Positives = 46/120 (38%)
Frame = +3
Query: 18 KLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLD 197
K + + EW + S K+ +NP +V W
Sbjct: 17 KYYADGEWKTSSSGKSVAIMNPATRKTQYKVQACTQEEVNAVMELAKSA---QKSWAKTP 73
Query: 198 ASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILG 377
+R LL K A +++ + +AE + KP K + EV+ + ++ Y A + +ILG
Sbjct: 74 LWKRAELLHKAAAILKDNKAPMAESLVKEIAKPAKDSVTEVVRSGDLISYCAEEGVRILG 133
>At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogenase,
putative similar to methylmalonate-semialdehyde
dehydrogenase [acylating], mitochondrial precursor
(MMSDH) [Rattus norvegicus] SWISS-PROT:Q02253
Length = 607
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTP 547
VC I P+N+P + +W A+ G T ++KP+E+ P
Sbjct: 252 VCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDP 289
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 33.5 bits (73), Expect = 0.096
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 446 ILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTP 547
I WNYP + I + A++AG VV+KP+E P
Sbjct: 119 ISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAP 152
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 33.5 bits (73), Expect = 0.096
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 446 ILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTP 547
I WNYP + I + A++AG VV+KP+E P
Sbjct: 119 ISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAP 152
>At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 390
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 446 ILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTP 547
I WN+P + + + A+AAG VV+KP+E P
Sbjct: 182 ISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAP 215
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 446 ILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTP 547
I WN+P + + + A+AAG VV+KP+E P
Sbjct: 182 ISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAP 215
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 455 WNYPIPMFIWNIAPALAAGCTVVVKPAEQTP 547
WN+PI + + + A+AAG TV++K +E +P
Sbjct: 118 WNFPISLSLDPLIGAIAAGNTVLLKSSELSP 148
>At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
+ G I +N+P + WN AL G VV K A TPL
Sbjct: 157 IVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
>At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAEQTPL 550
+ G I +N+P + WN AL G VV K A TPL
Sbjct: 157 IVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
>At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 596
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAE 538
V G I+PWNYP + A+ +G +V+K +E
Sbjct: 191 VIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
>At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 554
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 434 VCGQILPWNYPIPMFIWNIAPALAAGCTVVVKPAE 538
V G I+PWNYP + A+ +G +V+K +E
Sbjct: 191 VIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
>At5g18470.1 68418.m02175 curculin-like (mannose-binding) lectin
family protein contains Pfam profile: PF01453 lectin
(probable mannose binding)
Length = 413
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 176 LRMASPGCFTKRPTALQTGHPHGERRKIFSRTRNTG 283
L+ +S C T++PTA + G + E R+ + NTG
Sbjct: 313 LKNSSAICITEKPTACRKGSEYFEPRRGYMMENNTG 348
>At3g50300.1 68416.m05501 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase,
Dianthus caryophyllus [gi:2239091]; contains Pfam
transferase family domain PF002458
Length = 448
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -2
Query: 125 LVTLSNLDDDTLILRIDCREGFLADSVHPFVVNEQLSILDV 3
LV ++N +D+T+ IDC +G VH + E +S+ D+
Sbjct: 77 LVKVNNHEDNTVSFYIDCDDGRGVKFVH--AIAESVSVSDI 115
>At3g60960.1 68416.m06821 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 403
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -2
Query: 128 SLVTLSNLDDDTLILRIDCREGFLADSVHPFVVNEQLSIL 9
+++ +SNLD+ + + R+ GFL D F+ N + +
Sbjct: 59 AMIEMSNLDEASKLSRLAVLNGFLVDRDTVFICNSVIGAM 98
>At2g28600.1 68415.m03476 expressed protein
Length = 502
Score = 27.1 bits (57), Expect = 8.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -2
Query: 290 SVVQCFEFC*IFCVSLHEGGQFEEQ*ASL*SIQETPFGVTMESLL--CSSNG*VDVSLVT 117
SV + + I VSLH+G + Q + L S++ T E LL + G VD+S V+
Sbjct: 214 SVCKALKGIGIHTVSLHQGAPLDHQISGLKSVEPEFIVATPERLLEIVTLKG-VDISNVS 272
Query: 116 LSNLDD 99
L +D+
Sbjct: 273 LLVIDE 278
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,116,475
Number of Sequences: 28952
Number of extensions: 239997
Number of successful extensions: 604
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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