Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M01
(575 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 206 1e-53
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 1e-33
SB_39426| Best HMM Match : C4 (HMM E-Value=0) 106 1e-23
SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32) 97 7e-21
SB_7057| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_41466| Best HMM Match : Collagen (HMM E-Value=9.2) 29 2.1
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05) 29 3.6
SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0) 28 4.8
SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_52940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_52937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_43056| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_8499| Best HMM Match : DUF229 (HMM E-Value=0) 28 6.3
SB_43233| Best HMM Match : Caudal_act (HMM E-Value=5.7) 28 6.3
SB_42074| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_36452| Best HMM Match : Collagen (HMM E-Value=0.35) 28 6.3
SB_36287| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_14703| Best HMM Match : Borrelia_orfA (HMM E-Value=0.14) 28 6.3
SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_58441| Best HMM Match : Lipoxygenase (HMM E-Value=3.4e-15) 27 8.3
SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5) 27 8.3
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 206 bits (502), Expect = 1e-53
Identities = 85/140 (60%), Positives = 108/140 (77%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
F+ T HSQT +P+CP LWEG+SL+++ N +AHGQDLG+PGSC+++FSTMP++FC
Sbjct: 1575 FFLTRHSQTVRVPRCPEDRPPLWEGYSLLYVQGNERAHGQDLGSPGSCIQRFSTMPFLFC 1634
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
N+NNVC+ A R DYSFWLSTPEP+P M P+Q +V YI RC VCE + +AVHSQS
Sbjct: 1635 NINNVCNLASRNDYSFWLSTPEPIP--MMPVQETNVQPYIGRCAVCEVSSHVMAVHSQSI 1692
Query: 436 TVPTCPNGWEELWIGYSFLM 495
TVP+CP+GW LW GYSFLM
Sbjct: 1693 TVPSCPSGWSPLWQGYSFLM 1712
Score = 93.9 bits (223), Expect = 8e-20
Identities = 41/64 (64%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = +1
Query: 370 YISRCQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGYSFLMHTACA-DASGQSLISPGS 546
YI RC VCE + +AVHSQS TVP+CP+GW LW GYSFLMHT+ D SGQ L SPGS
Sbjct: 1714 YIGRCAVCEVSSHVMAVHSQSITVPSCPSGWSPLWQGYSFLMHTSAGNDGSGQLLSSPGS 1773
Query: 547 CLRE 558
CL +
Sbjct: 1774 CLED 1777
Score = 85.0 bits (201), Expect = 4e-17
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFS-LIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLN 264
+HSQ+ +P CP+G S LW+G+S L+H A GQ L +PGSCL F P++ C+
Sbjct: 1730 VHSQSITVPSCPSGWSPLWQGYSFLMHTSAGNDGSGQLLSSPGSCLEDFRAHPFIECHGR 1789
Query: 265 NVCDFAQREDYSFWLSTPEPMPMAMTP----IQARDVGTYISRCQVCEAPTRT 411
C + YSFWL+T + P ++A ++ +SRCQVC+ R+
Sbjct: 1790 GTCHY-YGSTYSFWLATVDQNKQFRIPRPETLKAGNLRERVSRCQVCQKNIRS 1841
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/49 (46%), Positives = 26/49 (53%)
Frame = +1
Query: 421 HSQSNTVPTCPNGWEELWIGYSFLMHTACADASGQSLISPGSCLRESVT 567
HSQ+ VP CP LW GYS L A GQ L SPGSC++ T
Sbjct: 1580 HSQTVRVPRCPEDRPPLWEGYSLLYVQGNERAHGQDLGSPGSCIQRFST 1628
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 140 bits (338), Expect = 1e-33
Identities = 72/160 (45%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
FY HSQT P+CP LW+G+SL+++ + +HGQDLG GSCL++F+TMPY++C
Sbjct: 1461 FYIVKHSQTTTPPECPPTYDKLWDGYSLLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYC 1520
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
N+ C++A R DYS+WLST +P M PIQA V YISRC VCE+ +AVHS+
Sbjct: 1521 NIFGKCNYASRNDYSYWLSTDNQVP--MMPIQASAVEPYISRCTVCESHGPVMAVHSK-- 1576
Query: 436 TVPTCPNGWEELWIGYSFLMHT-ACADASGQSLISPGSCL 552
+ HT A +GQSL S GSCL
Sbjct: 1577 ---------------HDLTNHTGAGGSGTGQSLGSSGSCL 1601
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 163 HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDFAQREDYSFWLSTPE-PMPMAM 339
H A G GQ LG+ GSCL F P+ C+ C + + YSFWL+T P
Sbjct: 1582 HTGAGGSGTGQSLGSSGSCLESFRPNPFTECHGRGTCHYYANK-YSFWLATVNTPFQTQQ 1640
Query: 340 TP-IQARDVGTYISRCQVC 393
+ ++A ++ + +SRCQVC
Sbjct: 1641 SETLKAGNLLSRVSRCQVC 1659
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +1
Query: 412 IAVHSQSNTVPTCPNGWEELWIGYSFLMHTACADASGQSLISPGSCLRESVT 567
I HSQ+ T P CP +++LW GYS L + GQ L GSCL+ T
Sbjct: 1463 IVKHSQTTTPPECPPTYDKLWDGYSLLYVQGHDVSHGQDLGQAGSCLKRFTT 1514
>SB_39426| Best HMM Match : C4 (HMM E-Value=0)
Length = 188
Score = 106 bits (254), Expect = 1e-23
Identities = 52/85 (61%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +1
Query: 301 FWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIG 480
+WLST +PM PIQA V YISRC VCE+ +AVHSQS T+PTCP GW LW G
Sbjct: 2 YWLSTDNQVPMM--PIQASAVEPYISRCTVCESHGPVMAVHSQSTTLPTCPGGWSSLWSG 59
Query: 481 YSFLMHT-ACADASGQSLISPGSCL 552
YSFLMHT A +GQSL S GSCL
Sbjct: 60 YSFLMHTGAGGSGTGQSLGSSGSCL 84
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFS-LIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLN 264
+HSQ+ +P CP G SSLW G+S L+H A G GQ LG+ GSCL F P++ C+
Sbjct: 39 VHSQSTTLPTCPGGWSSLWSGYSFLMHTGAGGSGTGQSLGSSGSCLESFRPNPFIECHGR 98
Query: 265 NVCDFAQREDYSFWLSTPE-PMPMAMT-PIQARDVGTYISRCQVC 393
C + + YSFWL+T P + ++A ++ + +SRCQVC
Sbjct: 99 GTCHYYANK-YSFWLATVNTPFQTQQSETLKAGNLLSRVSRCQVC 142
>SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32)
Length = 176
Score = 97.5 bits (232), Expect = 7e-21
Identities = 37/75 (49%), Positives = 53/75 (70%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
FY HSQT P+CP LW+G+SL+++ + +HGQDLG GSCL++F+TMPY++C
Sbjct: 65 FYIVKHSQTTTPPECPPTYDKLWDGYSLLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYC 124
Query: 256 NLNNVCDFAQREDYS 300
N+ C++A R DYS
Sbjct: 125 NIFGKCNYASRNDYS 139
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +1
Query: 412 IAVHSQSNTVPTCPNGWEELWIGYSFLMHTACADASGQSLISPGSCLRESVT 567
I HSQ+ T P CP +++LW GYS L + GQ L GSCL+ T
Sbjct: 67 IVKHSQTTTPPECPPTYDKLWDGYSLLYVQGHDVSHGQDLGQAGSCLKRFTT 118
>SB_7057| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + S V CP GW + GY
Sbjct: 112 CAVCYVPSRSTQLMIPS--VARCPTGWSREYYGY 143
>SB_41466| Best HMM Match : Collagen (HMM E-Value=9.2)
Length = 288
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGYSFLMH 498
C VC P+R+ + + V CP GW + GY H
Sbjct: 151 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGYLMTSH 187
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGYSFLMH 498
C VC P+R+ + + V CP GW + GY H
Sbjct: 65 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGYLMTEH 101
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 425 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 456
>SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05)
Length = 131
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = -3
Query: 63 WYWRRWCR--CTWSTYRSLK 10
WYW+RWCR T Y ++K
Sbjct: 28 WYWQRWCRQNATSMIYETVK 47
>SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 818
Score = 28.3 bits (60), Expect = 4.8
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +1
Query: 391 CEAPTRTIAVHSQSNTVPTCPNGWE 465
C+A T+ + +H+++ CP+ W+
Sbjct: 276 CQAGTKKVIIHTKACNTDPCPDAWD 300
>SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +1
Query: 286 REDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSNTVPTCP 453
R D + +TP + I++ GT S + PT A H +T PT P
Sbjct: 526 RRDTVYIRTTPTGTCASRMTIRSTPTGTCASHVSISTTPTGPCASHVSISTTPTGP 581
>SB_52940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 77 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 108
>SB_52937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 125 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 156
>SB_43056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 53 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 84
>SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 198 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 229
>SB_8499| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 926
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +3
Query: 123 CRNIIAVGR--IFFNSHRC*WESSWPRFRCPWQLLTQILNNAIHVL 254
C NII G + S +C W+ WP W L ++ I L
Sbjct: 155 CTNIIFAGSKVVIELSRQCEWKHGWPSVLARWPLTAVAQSSRIRTL 200
>SB_43233| Best HMM Match : Caudal_act (HMM E-Value=5.7)
Length = 118
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 65 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 96
>SB_42074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 89 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 120
>SB_36452| Best HMM Match : Collagen (HMM E-Value=0.35)
Length = 374
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 99 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 130
>SB_36287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 65 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 96
>SB_14703| Best HMM Match : Borrelia_orfA (HMM E-Value=0.14)
Length = 558
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 84 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 115
>SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 82 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 113
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 382 CQVCEAPTRTIAVHSQSNTVPTCPNGWEELWIGY 483
C VC P+R+ + + V CP GW + GY
Sbjct: 701 CAVCYVPSRSTQLMIPA--VARCPAGWSREYYGY 732
>SB_58441| Best HMM Match : Lipoxygenase (HMM E-Value=3.4e-15)
Length = 621
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -3
Query: 198 ILAMSFPISNDVN*RKSFPQR*CSCRTLW--Y*PRLRMYGKIEST*--FWYWRRW 46
+ A+ +P+++D+ K + RTLW Y P + ++ +E WYW+RW
Sbjct: 223 LFALRYPLADDMVFMKDIVDDHAN-RTLWPFYSP-IALFASVEEKPPKNWYWKRW 275
>SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5)
Length = 563
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 435 ITLTVYSDRSCRSFANLTS*NICAYVSCLYRSHSHGHGFWRRQPETIVFS 286
+T TV R C ++ +T V+ L R H+HGH F T+ S
Sbjct: 159 VTRTVSLSRRCHTYGAVTR-----TVTLLRRCHTHGHSFKGAVTRTVSLS 203
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,982,402
Number of Sequences: 59808
Number of extensions: 409691
Number of successful extensions: 1131
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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