Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_M01
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 234 3e-62
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 234 3e-62
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 234 3e-62
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 234 3e-62
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 217 5e-57
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 217 5e-57
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 215 1e-56
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 213 1e-55
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 213 1e-55
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 213 1e-55
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 27 7.2
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 234 bits (573), Expect = 3e-62
Identities = 100/162 (61%), Positives = 119/162 (73%), Gaps = 1/162 (0%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
F F HSQT +PQCP G S LWEG+SL+++ NG+A GQDLG PGSCL KF+TMP+MFC
Sbjct: 1279 FTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFC 1338
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
N+N+VC + R DYSFWLST EPM M P+ + YISRC VCE PT+ IAVHSQ
Sbjct: 1339 NMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDT 1398
Query: 436 TVPTCPNGWEELWIGYSFLMHTAC-ADASGQSLISPGSCLRE 558
+VP CP GW +W GYSF+MHTA A+ +GQSL SPGSCL E
Sbjct: 1399 SVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEE 1440
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFSLI-HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLN 264
+HSQ +PQCP G S +W G+S + H A + GQ L +PGSCL +F +P++ C+
Sbjct: 1393 VHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR 1452
Query: 265 NVCDFAQREDYSFWLSTPEP-----MPMAMTPIQARDVGTYISRCQVC 393
C++ ++ FWLS + PM+ T ++A + +SRCQVC
Sbjct: 1453 GTCNY-YATNHGFWLSIVDQDKQFRKPMSQT-LKAGGLKDRVSRCQVC 1498
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 234 bits (573), Expect = 3e-62
Identities = 100/162 (61%), Positives = 119/162 (73%), Gaps = 1/162 (0%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
F F HSQT +PQCP G S LWEG+SL+++ NG+A GQDLG PGSCL KF+TMP+MFC
Sbjct: 1536 FTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFC 1595
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
N+N+VC + R DYSFWLST EPM M P+ + YISRC VCE PT+ IAVHSQ
Sbjct: 1596 NMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDT 1655
Query: 436 TVPTCPNGWEELWIGYSFLMHTAC-ADASGQSLISPGSCLRE 558
+VP CP GW +W GYSF+MHTA A+ +GQSL SPGSCL E
Sbjct: 1656 SVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEE 1697
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFSLI-HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLN 264
+HSQ +PQCP G S +W G+S + H A + GQ L +PGSCL +F +P++ C+
Sbjct: 1650 VHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR 1709
Query: 265 NVCDFAQREDYSFWLSTPEP-----MPMAMTPIQARDVGTYISRCQVC 393
C++ ++ FWLS + PM+ T ++A + +SRCQVC
Sbjct: 1710 GTCNY-YATNHGFWLSIVDQDKQFRKPMSQT-LKAGGLKDRVSRCQVC 1755
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 234 bits (573), Expect = 3e-62
Identities = 100/162 (61%), Positives = 119/162 (73%), Gaps = 1/162 (0%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
F F HSQT +PQCP G S LWEG+SL+++ NG+A GQDLG PGSCL KF+TMP+MFC
Sbjct: 1535 FTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFC 1594
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
N+N+VC + R DYSFWLST EPM M P+ + YISRC VCE PT+ IAVHSQ
Sbjct: 1595 NMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDT 1654
Query: 436 TVPTCPNGWEELWIGYSFLMHTAC-ADASGQSLISPGSCLRE 558
+VP CP GW +W GYSF+MHTA A+ +GQSL SPGSCL E
Sbjct: 1655 SVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEE 1696
Score = 80.6 bits (190), Expect = 7e-16
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFSLI-HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLN 264
+HSQ +PQCP G S +W G+S + H A + GQ L +PGSCL +F +P++ C+
Sbjct: 1649 VHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR 1708
Query: 265 NVCDFAQREDYSFWLSTPEP-----MPMAMTPIQARDVGTYISRCQVC 393
C++ ++ FW S + PM+ T ++A + +SRCQVC
Sbjct: 1709 GTCNY-YATNHGFWPSIVDQDKQFRKPMSQT-LKAGGLKDRVSRCQVC 1754
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 234 bits (573), Expect = 3e-62
Identities = 100/162 (61%), Positives = 119/162 (73%), Gaps = 1/162 (0%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
F F HSQT +PQCP G S LWEG+SL+++ NG+A GQDLG PGSCL KF+TMP+MFC
Sbjct: 90 FTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFC 149
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
N+N+VC + R DYSFWLST EPM M P+ + YISRC VCE PT+ IAVHSQ
Sbjct: 150 NMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDT 209
Query: 436 TVPTCPNGWEELWIGYSFLMHTAC-ADASGQSLISPGSCLRE 558
+VP CP GW +W GYSF+MHTA A+ +GQSL SPGSCL E
Sbjct: 210 SVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEE 251
Score = 80.6 bits (190), Expect = 7e-16
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFSLI-HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLN 264
+HSQ +PQCP G S +W G+S + H A + GQ L +PGSCL +F +P++ C+
Sbjct: 204 VHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR 263
Query: 265 NVCDFAQREDYSFWLSTPEP-----MPMAMTPIQARDVGTYISRCQVC 393
C++ ++ FW S + PM+ T ++A + +SRCQVC
Sbjct: 264 GTCNY-YATNHGFWPSIVDQDKQFRKPMSQT-LKAGGLKDRVSRCQVC 309
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 217 bits (530), Expect = 5e-57
Identities = 94/162 (58%), Positives = 118/162 (72%), Gaps = 1/162 (0%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
F HSQT +P+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC
Sbjct: 1532 FVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1591
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
+ NNVC++A R D S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+
Sbjct: 1592 DFNNVCNYASRNDKSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTI 1649
Query: 436 TVPTCPNGWEELWIGYSFLMHT-ACADASGQSLISPGSCLRE 558
+P CP GW LWIGYSF MHT A A+ GQSL SPGSCL +
Sbjct: 1650 QIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLED 1691
Score = 84.6 bits (200), Expect = 4e-17
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 261
+HSQT IP CPAG SSLW G+S +H A + GQ L +PGSCL F P++ CN
Sbjct: 1644 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGA 1703
Query: 262 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 405
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 1704 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 1754
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +1
Query: 421 HSQSNTVPTCPNGWEELWIGYSFLMHTACADASGQSLISPGSCLRESVT 567
HSQ+ VP CP G +LW GYS L + Q L GSCL+ T
Sbjct: 1537 HSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFST 1585
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 217 bits (530), Expect = 5e-57
Identities = 94/162 (58%), Positives = 118/162 (72%), Gaps = 1/162 (0%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
F HSQT +P+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC
Sbjct: 1533 FVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1592
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
+ NNVC++A R D S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+
Sbjct: 1593 DFNNVCNYASRNDKSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTI 1650
Query: 436 TVPTCPNGWEELWIGYSFLMHT-ACADASGQSLISPGSCLRE 558
+P CP GW LWIGYSF MHT A A+ GQSL SPGSCL +
Sbjct: 1651 QIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLED 1692
Score = 84.6 bits (200), Expect = 4e-17
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 261
+HSQT IP CPAG SSLW G+S +H A + GQ L +PGSCL F P++ CN
Sbjct: 1645 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGA 1704
Query: 262 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 405
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 1705 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 1755
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +1
Query: 421 HSQSNTVPTCPNGWEELWIGYSFLMHTACADASGQSLISPGSCLRESVT 567
HSQ+ VP CP G +LW GYS L + Q L GSCL+ T
Sbjct: 1538 HSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFST 1586
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 215 bits (526), Expect = 1e-56
Identities = 93/162 (57%), Positives = 118/162 (72%), Gaps = 1/162 (0%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
F HSQT +P+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC
Sbjct: 35 FVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 94
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
+ NNVC++A R + S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+
Sbjct: 95 DFNNVCNYASRNEKSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTI 152
Query: 436 TVPTCPNGWEELWIGYSFLMHT-ACADASGQSLISPGSCLRE 558
+P CP GW LWIGYSF MHT A A+ GQSL SPGSCL +
Sbjct: 153 QIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLED 194
Score = 84.6 bits (200), Expect = 4e-17
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 261
+HSQT IP CPAG SSLW G+S +H A + GQ L +PGSCL F P++ CN
Sbjct: 147 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGA 206
Query: 262 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 405
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 207 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 257
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +1
Query: 421 HSQSNTVPTCPNGWEELWIGYSFLMHTACADASGQSLISPGSCLRESVT 567
HSQ+ VP CP G +LW GYS L + Q L GSCL+ T
Sbjct: 40 HSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFST 88
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 213 bits (519), Expect = 1e-55
Identities = 92/162 (56%), Positives = 117/162 (72%), Gaps = 1/162 (0%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
F HSQT +P+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC
Sbjct: 1533 FVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1592
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
+ NNVC++A R + S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+
Sbjct: 1593 DFNNVCNYASRNEKSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTI 1650
Query: 436 TVPTCPNGWEELWIGYSFLMHT-ACADASGQSLISPGSCLRE 558
+P CP GW LWIGYSF MHT A A+ GQS SPGSCL +
Sbjct: 1651 QIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLED 1692
Score = 81.8 bits (193), Expect = 3e-16
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 261
+HSQT IP CPAG SSLW G+S +H A + GQ +PGSCL F P++ CN
Sbjct: 1645 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGA 1704
Query: 262 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 405
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 1705 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 1755
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +1
Query: 421 HSQSNTVPTCPNGWEELWIGYSFLMHTACADASGQSLISPGSCLRESVT 567
HSQ+ VP CP G +LW GYS L + Q L GSCL+ T
Sbjct: 1538 HSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFST 1586
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 213 bits (519), Expect = 1e-55
Identities = 92/162 (56%), Positives = 117/162 (72%), Gaps = 1/162 (0%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
F HSQT +P+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC
Sbjct: 1532 FVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1591
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
+ NNVC++A R + S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+
Sbjct: 1592 DFNNVCNYASRNEKSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTI 1649
Query: 436 TVPTCPNGWEELWIGYSFLMHT-ACADASGQSLISPGSCLRE 558
+P CP GW LWIGYSF MHT A A+ GQS SPGSCL +
Sbjct: 1650 QIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLED 1691
Score = 81.8 bits (193), Expect = 3e-16
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 261
+HSQT IP CPAG SSLW G+S +H A + GQ +PGSCL F P++ CN
Sbjct: 1644 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGA 1703
Query: 262 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 405
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 1704 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 1754
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +1
Query: 421 HSQSNTVPTCPNGWEELWIGYSFLMHTACADASGQSLISPGSCLRESVT 567
HSQ+ VP CP G +LW GYS L + Q L GSCL+ T
Sbjct: 1537 HSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFST 1585
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 213 bits (519), Expect = 1e-55
Identities = 92/162 (56%), Positives = 117/162 (72%), Gaps = 1/162 (0%)
Frame = +1
Query: 76 FYFTIHSQTRLIPQCPAGTSSLWEGFSLIHIVANGKAHGQDLGAPGSCLRKFSTMPYMFC 255
F HSQT +P+CP G + LW+G+SL++I N K+H QDLG GSCL++FSTMP++FC
Sbjct: 1569 FVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1628
Query: 256 NLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDVGTYISRCQVCEAPTRTIAVHSQSN 435
+ NNVC++A R + S+WLST E +P M P+ R++ YISRC VCEAP TIAVHSQ+
Sbjct: 1629 DFNNVCNYASRNEKSYWLSTSEAIP--MMPVNEREIEPYISRCAVCEAPANTIAVHSQTI 1686
Query: 436 TVPTCPNGWEELWIGYSFLMHT-ACADASGQSLISPGSCLRE 558
+P CP GW LWIGYSF MHT A A+ GQS SPGSCL +
Sbjct: 1687 QIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLED 1728
Score = 81.8 bits (193), Expect = 3e-16
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Frame = +1
Query: 88 IHSQTRLIPQCPAGTSSLWEGFSL-IHIVANGKAHGQDLGAPGSCLRKFSTMPYMFCN-L 261
+HSQT IP CPAG SSLW G+S +H A + GQ +PGSCL F P++ CN
Sbjct: 1681 VHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGA 1740
Query: 262 NNVCDFAQREDYSFWLSTPE-----PMPMAMTPIQARDVGTYISRCQVCEAPT 405
C + + +SFWL+T + +P + T +++ ++ T +SRCQVC T
Sbjct: 1741 RGSCHYFANK-FSFWLTTIDNDSEFKVPESQT-LKSGNLRTRVSRCQVCVKST 1791
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +1
Query: 421 HSQSNTVPTCPNGWEELWIGYSFLMHTACADASGQSLISPGSCLRESVT 567
HSQ+ VP CP G +LW GYS L + Q L GSCL+ T
Sbjct: 1574 HSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFST 1622
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 163 HIVANGKAHGQDLGAPGSCLRKFSTMPYMFCNLNNVCDF 279
H+ G A+ QD+G C+ KF T N++ C F
Sbjct: 53 HLFTTGSAN-QDVGFQSKCVGKFDTGSMATMNMDVACAF 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,757,754
Number of Sequences: 27780
Number of extensions: 302828
Number of successful extensions: 852
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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