Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_M01
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.9  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   6.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   8.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.7  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 345 YTSKRRRHIYFKMSSLR 395
           Y SKRR  +Y+ M  +R
Sbjct: 133 YRSKRRGFVYYTMGQIR 149


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 328 AWVLASTARNYSLLVERNHKRCSNY 254
           +WV  S  RNY+L  E +     ++
Sbjct: 274 SWVNTSVIRNYTLFNENSEAAARSF 298


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 324 HAHGYDSYTSKRRRHIYFKMSSLRSSDTNDR 416
           ++H  D +    +   Y K+  + SSDT+ R
Sbjct: 151 YSHQTDVWVELLKHFNYMKVIFIHSSDTDGR 181


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 497 TPLAQMHRDKVLYLLGHVCES 559
           T  +QM+ +K+  LLGH   S
Sbjct: 478 TGTSQMYAEKLSELLGHAFHS 498


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,168
Number of Sequences: 438
Number of extensions: 3653
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)