Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_L24
         (346 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   4.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   8.2  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 38  NDYFFYSFIYSINISKFDSCTDLYN 112
           N  F + FI    +S F+SCT L N
Sbjct: 390 NFMFSFGFILLRFLSVFESCTRLNN 414


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 82  TDINRIYETVEKII 41
           T++ R Y+ VEKI+
Sbjct: 65  TNLKRFYKVVEKIL 78


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +3

Query: 15  LYLINSNKMIIFSTVSYILLISVNLIRAQTCTTPRNESGNCV 140
           L  I  N +++   +   L I +   +A+ CTT      NCV
Sbjct: 218 LVFITINFVVLLGDLYVTLYIILTNNQAKYCTTLIGLIKNCV 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,951
Number of Sequences: 336
Number of extensions: 1739
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)