Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L24
(346 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035609-1|AAH35609.1| 1195|Homo sapiens myotubularin related pr... 29 3.9
AF264717-1|AAF72539.1| 1195|Homo sapiens FYVE domain-containing ... 29 3.9
AB014547-1|BAA31622.2| 1195|Homo sapiens KIAA0647 protein protein. 29 3.9
M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenou... 29 5.2
AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein. 29 5.2
AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein. 29 5.2
AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein. 29 5.2
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 29 5.2
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 29 5.2
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 29 5.2
AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein. 29 5.2
AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein. 29 5.2
>BC035609-1|AAH35609.1| 1195|Homo sapiens myotubularin related
protein 4 protein.
Length = 1195
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 195 AEDKKLLG-DSQCGYENNIPMVCCPISNACKTPDD 296
A+ +LG S+C ++++ VC P S AC+TP D
Sbjct: 793 AQPDSMLGVPSKCVLDHSLSTVCNPPSAACQTPLD 827
>AF264717-1|AAF72539.1| 1195|Homo sapiens FYVE domain-containing
dual specificity protein phosphatase FYVE-DSP2 protein.
Length = 1195
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 195 AEDKKLLG-DSQCGYENNIPMVCCPISNACKTPDD 296
A+ +LG S+C ++++ VC P S AC+TP D
Sbjct: 793 AQPDSMLGVPSKCVLDHSLSTVCNPPSAACQTPLD 827
>AB014547-1|BAA31622.2| 1195|Homo sapiens KIAA0647 protein protein.
Length = 1195
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 195 AEDKKLLG-DSQCGYENNIPMVCCPISNACKTPDD 296
A+ +LG S+C ++++ VC P S AC+TP D
Sbjct: 793 AQPDSMLGVPSKCVLDHSLSTVCNPPSAACQTPLD 827
>M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenous
retrovirus HERV-K10. ).
Length = 1361
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 96 AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 248
++ CTTP+ + ++LY LN++RN++ T+ ++ L G +E +
Sbjct: 667 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 714
>AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein.
Length = 727
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 96 AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 248
++ CTTP+ + ++LY LN++RN++ T+ ++ L G +E +
Sbjct: 628 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 675
>AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 96 AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 248
++ CTTP+ + ++LY LN++RN++ T+ ++ L G +E +
Sbjct: 765 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 812
>AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 96 AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 248
++ CTTP+ + ++LY LN++RN++ T+ ++ L G +E +
Sbjct: 765 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 812
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1879
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 96 AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 248
++ CTTP+ + ++LY LN++RN++ T+ ++ L G +E +
Sbjct: 1688 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 1735
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1755
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 96 AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 248
++ CTTP+ + ++LY LN++RN++ T+ ++ L G +E +
Sbjct: 1690 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 1737
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 96 AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 248
++ CTTP+ + ++LY LN++RN++ T+ ++ L G +E +
Sbjct: 1688 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 1735
>AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 96 AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 248
++ CTTP+ + ++LY LN++RN++ T+ ++ L G +E +
Sbjct: 765 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 812
>AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 96 AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 248
++ CTTP+ + ++LY LN++RN++ T+ ++ L G +E +
Sbjct: 765 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 812
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,211,016
Number of Sequences: 237096
Number of extensions: 822054
Number of successful extensions: 1334
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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