Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_L24
         (346 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical p...    27   4.8  
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    27   4.8  
Z68003-3|CAA91977.1|  849|Caenorhabditis elegans Hypothetical pr...    26   6.3  
U67947-2|AAB07558.1|  204|Caenorhabditis elegans Hypothetical pr...    26   6.3  
Z81502-5|CAB04108.2|  672|Caenorhabditis elegans Hypothetical pr...    26   8.3  
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr...    26   8.3  

>Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical
           protein C01G10.1 protein.
          Length = 1204

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 127 DSFLGVVQVCARIKFTDINRIYETVEKIIILL 32
           D F  ++ V  ++  T++NR+ E  EK+ +LL
Sbjct: 59  DQFNNIIDVDIKVARTELNRMGEEFEKLSLLL 90


>Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical
           protein C36B1.12b protein.
          Length = 640

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 240 NNIPMVCCPISNACKTPDD 296
           N +P+ C P+ N+  +PDD
Sbjct: 596 NGVPVECSPLINSSSSPDD 614


>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
           protein E01G6.1 protein.
          Length = 1391

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = +3

Query: 153 CEPLLNLFRNKSRTAEDKKLLGDSQC--GYENNIPMVCCPIS-NACKTPDDKPGICVG 317
           C+ L+ L   K+  +E ++   +  C  GYE N    CCP S NAC     +   C G
Sbjct: 424 CDGLVPL---KNPNSELQRCSEEDPCPAGYECNDSSYCCPSSENACNANMSRGNGCKG 478


>Z68003-3|CAA91977.1|  849|Caenorhabditis elegans Hypothetical
           protein E02H4.4 protein.
          Length = 849

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 186 SRTAEDKKLLGDSQCGYENNIPMVCCPISNACKTPDDKP 302
           ++T     + GD  C   NN+     PISN+  T D  P
Sbjct: 128 TQTGNGISVNGDCACYEANNVTGKSAPISNSYMTEDFSP 166


>U67947-2|AAB07558.1|  204|Caenorhabditis elegans Hypothetical
           protein H03E18.2 protein.
          Length = 204

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 223 HNVVMRIIYLWCAVPFQTLVRLQTINREFVSVCTTVSIL 339
           H++VM I Y +C   F      Q    E +S C++ S L
Sbjct: 111 HHIVMAISYCFCLFLFAMFAWKQHFFVEILSFCSSFSTL 149


>Z81502-5|CAB04108.2|  672|Caenorhabditis elegans Hypothetical
           protein F14B6.5 protein.
          Length = 672

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 17/69 (24%), Positives = 29/69 (42%)
 Frame = +3

Query: 57  VSYILLISVNLIRAQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGY 236
           + ++  ++V LI        R E+ N  S  + +  + +  N      D+K L  S C Y
Sbjct: 367 IVFLFFLNVILINKDELIPDREENNNHNSSMNTDDAIIM--NHQWNLNDQKSLWVSYCNY 424

Query: 237 ENNIPMVCC 263
           E   P+  C
Sbjct: 425 ETAGPLEWC 433


>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
            F57F4.4 protein.
          Length = 2090

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = +3

Query: 108  TTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNIPMVCCPISNACKT 287
            T P N     ++LY C+P+         T      L +S    +  +   CC  +N C  
Sbjct: 2000 TAPYNGGNQTLTLYTCDPV---------TVCTSLNLTNSCASIDGGLSGCCCS-TNNCVG 2049

Query: 288  PDDKPGI 308
            P++ PGI
Sbjct: 2050 PNNGPGI 2056


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,886,872
Number of Sequences: 27780
Number of extensions: 152090
Number of successful extensions: 398
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)