Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_L22
         (351 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7KVL6 Cluster: CG13503-PE, isoform E; n=3; Drosophila ...    32   3.1  
UniRef50_A1ATT6 Cluster: Two component transcriptional regulator...    31   5.4  
UniRef50_Q9SZT3 Cluster: Putative uncharacterized protein AT4g35...    30   9.5  
UniRef50_A2EPV2 Cluster: PAS domain S-box family protein; n=1; T...    30   9.5  

>UniRef50_Q7KVL6 Cluster: CG13503-PE, isoform E; n=3; Drosophila
           melanogaster|Rep: CG13503-PE, isoform E - Drosophila
           melanogaster (Fruit fly)
          Length = 761

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 15/52 (28%), Positives = 31/52 (59%)
 Frame = -3

Query: 175 SGMVRLTMSESDVCIRKSTMNSSEFTMNLSLVALLADGATATSAIRSTAPGK 20
           SG V+   +  ++ +  S +NSS+ T++ S  +L +   ++T ++R+ AP K
Sbjct: 279 SGSVKSKAANLNISLGNSFVNSSKSTVSASTASLNSSLTSSTGSVRNLAPNK 330


>UniRef50_A1ATT6 Cluster: Two component transcriptional regulator,
           LuxR family; n=2; Desulfuromonadales|Rep: Two component
           transcriptional regulator, LuxR family - Pelobacter
           propionicus (strain DSM 2379)
          Length = 203

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 169 MVRLTMSESDVCIRKSTMNSSEFTMNLSLVALLADGATATSAIRSTAP 26
           M+R+ +++  V  R+  +N      ++ + A   DGATA   IRS  P
Sbjct: 1   MIRVLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATALELIRSLEP 48


>UniRef50_Q9SZT3 Cluster: Putative uncharacterized protein
           AT4g35850; n=3; Arabidopsis thaliana|Rep: Putative
           uncharacterized protein AT4g35850 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 477

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +1

Query: 199 KQMTQIPTNPHLSQTAHLQKTLTVIRYYIS*KATSMIKDIKYTKVSTL 342
           +++  IPT  +  +T  LQ+ LTV  Y+++  A + +KD+K  K   L
Sbjct: 235 EELYNIPTADYSHRTRFLQRNLTV--YHVAFSALADLKDVKIPKCPEL 280


>UniRef50_A2EPV2 Cluster: PAS domain S-box family protein; n=1;
           Trichomonas vaginalis G3|Rep: PAS domain S-box family
           protein - Trichomonas vaginalis G3
          Length = 362

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +3

Query: 96  IVNSELFIVDFLIHTSDSDIVSLTMPLNLKHSN 194
           ++N++LFI  FLIH  +S   S T+  N+ HS+
Sbjct: 193 LINNKLFIKHFLIHEHESKEESKTVSGNIIHSS 225


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,201,427
Number of Sequences: 1657284
Number of extensions: 4128924
Number of successful extensions: 9356
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9354
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)