Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_L21
         (463 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   3.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   3.7  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   4.9  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   6.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   6.5  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 404 HISTLYGLLLNKVKCVFWT 460
           H S  + L LNKV  VF+T
Sbjct: 140 HPSATFSLDLNKVVSVFYT 158


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 240 PDRFGAVIPHTCRPPRPMEE 299
           P   GA+   TCR P P+ E
Sbjct: 478 PSIRGAIQQWTCRQPEPLIE 497


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 257 CHTTHVSSASADGRE 301
           CHT H++   AD +E
Sbjct: 363 CHTAHIACKFADIKE 377


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 449 HILPCLITARIESRCV 402
           H++P  +TA++   CV
Sbjct: 18  HVIPAELTAKLLGNCV 33


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = -3

Query: 212 GAPADAARAHKRQHTPQEGRSP 147
           GAP      H+    PQ G  P
Sbjct: 19  GAPGPQPSPHQSPQAPQRGSPP 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,518
Number of Sequences: 438
Number of extensions: 2263
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)