Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L17
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 34 0.099
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 34 0.099
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 30 1.6
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 30 1.6
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL032637-5|CAA21609.1| 245|Caenorhabditis elegans Hypothetical ... 28 6.5
AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2 pro... 28 6.5
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 28 6.5
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 27 8.6
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 33.9 bits (74), Expect = 0.099
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Frame = +2
Query: 314 KNDWDIYNSQRSRRTSESAEKVGLSGGRVRKVSESRSEGPTLSPRAVGLSPHRSAPAMRS 493
K D +RS +S+ + + R R S R P+ PR SP R P
Sbjct: 127 KKDKKKKKKKRSSSSSDESSDERVERKRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPK 186
Query: 494 LSYCRAPQ-SRVSLRGVPDSPSKGSASPSGVARE-EKFHSRLVEKLKR 631
S + + SR SP + P VAR+ + SR E+L+R
Sbjct: 187 RSREESRKLSRKPSSSRSKSPRRSREDPRKVARKPSRSRSRSAERLRR 234
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 33.9 bits (74), Expect = 0.099
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Frame = +2
Query: 314 KNDWDIYNSQRSRRTSESAEKVGLSGGRVRKVSESRSEGPTLSPRAVGLSPHRSAPAMRS 493
K D +RS +S+ + + R R S R P+ PR SP R P
Sbjct: 127 KKDKKKKKKKRSSSSSDESSDERVERKRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPK 186
Query: 494 LSYCRAPQ-SRVSLRGVPDSPSKGSASPSGVARE-EKFHSRLVEKLKR 631
S + + SR SP + P VAR+ + SR E+L+R
Sbjct: 187 RSREESRKLSRKPSSSRSKSPRRSREDPRKVARKPSRSRSRSAERLRR 234
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.70
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +2
Query: 335 NSQRSRRTSESAEKVGLSGGRVRKVSESRSEGPTLSPRAVGLSPHRSAPAMRSLSYCRAP 514
++ RSR S S ++ S R S+SRS P R S RS RS ++
Sbjct: 210 SNSRSRSRSRSRDR-RRSRSRSSSRSKSRSRSPPKRSRRESKSKSRSRSRSRSADNRKSR 268
Query: 515 QSRVSLRGVPDSPS--KGSASPS 577
S + V SPS +GS SPS
Sbjct: 269 SPSRSPKKVDRSPSPPRGSRSPS 291
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 377 PSPQTPKYVETAANCICP 324
P P TPKY+E NC+ P
Sbjct: 119 PCPNTPKYLEVKYNCVVP 136
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 377 PSPQTPKYVETAANCICP 324
P P TPKY+E NC+ P
Sbjct: 119 PCPNTPKYLEVKYNCVVP 136
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +2
Query: 335 NSQRSRRTSESAEKVGLSGGRVRKVSESRSEGPTLSPRAVGLSPHRSAPAMRSLSYCRAP 514
++ R TSE++ + G V + + E T +P V + +AP + + S P
Sbjct: 1253 STSRIPTTSEASPEGGSGEAGVPESPDGSGESSTSAPDGVSPTSSATAPEVPTTSASSTP 1312
Query: 515 QSRVSLRGVPDSPSKGSASP 574
+ V G+P S SK +A P
Sbjct: 1313 DA-VEESGIP-STSKPTAEP 1330
>Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical
protein F11A1.3d protein.
Length = 719
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 311 VKNDWDIYNSQRSRRTSESAEKVGLSGGRVRKVSESRSEGPTLSPRAVGLSPHRSAPAM 487
+K +W + Q RR + G R + ++ +GP P LSPH A+
Sbjct: 149 MKKEWILNEEQLRRRKNSRLNNTGTCNKRSQPGNQQSPQGPNQQPH---LSPHHPGVAI 204
>Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical
protein F11A1.3b protein.
Length = 694
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 311 VKNDWDIYNSQRSRRTSESAEKVGLSGGRVRKVSESRSEGPTLSPRAVGLSPHRSAPAM 487
+K +W + Q RR + G R + ++ +GP P LSPH A+
Sbjct: 124 MKKEWILNEEQLRRRKNSRLNNTGTCNKRSQPGNQQSPQGPNQQPH---LSPHHPGVAI 179
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 311 VKNDWDIYNSQRSRRTSESAEKVGLSGGRVRKVSESRSEGPTLSPRAVGLSPHRSAPAM 487
+K +W + Q RR + G R + ++ +GP P LSPH A+
Sbjct: 183 MKKEWILNEEQLRRRKNSRLNNTGTCNKRSQPGNQQSPQGPNQQPH---LSPHHPGVAI 238
>AL032637-5|CAA21609.1| 245|Caenorhabditis elegans Hypothetical
protein Y43F8C.5 protein.
Length = 245
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -2
Query: 473 CDADSARRREATALAPRNATLTLSAHDLRSAQPSPQTPKYVETAAN 336
CDAD + +L P T T + P TPK +++AN
Sbjct: 182 CDADRYNKNGLCSLDPPTTTTTTTTTTTVKPPPPTTTPKSSDSSAN 227
>AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2
protein.
Length = 694
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 311 VKNDWDIYNSQRSRRTSESAEKVGLSGGRVRKVSESRSEGPTLSPRAVGLSPHRSAPAM 487
+K +W + Q RR + G R + ++ +GP P LSPH A+
Sbjct: 124 MKKEWILNEEQLRRRKNSRLNNTGTCNKRSQPGNQQSPQGPNQQPH---LSPHHPGVAI 179
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 311 VKNDWDIYNSQRSRRTSESAEKVGLSGGRVRKVSESRSEGPTLSPRAVGLSPHRSAPAM 487
+K +W + Q RR + G R + ++ +GP P LSPH A+
Sbjct: 183 MKKEWILNEEQLRRRKNSRLNNTGTCNKRSQPGNQQSPQGPNQQPH---LSPHHPGVAI 238
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = +2
Query: 386 SGGRVRKVSESRSEGPTLSPRAVGLSPHRSAPAMRSLSYCRAPQSRVSLRGVPDSPSKGS 565
S R R SES S + SP +++P R RAP + R DSP K S
Sbjct: 51 SRSRSRSSSESDSRSRSSSPVV------KNSPPKRKREPIRAPSASPPRRRRDDSPRKRS 104
Query: 566 ASP 574
SP
Sbjct: 105 RSP 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,014,417
Number of Sequences: 27780
Number of extensions: 248226
Number of successful extensions: 844
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -