Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L16
(535 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81041-14|CAN99675.1| 684|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z81041-13|CAN99674.1| 647|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z81041-5|CAB02790.1| 715|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81041-3|CAB02791.1| 713|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z83237-6|CAE17879.1| 549|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 8.5
U23516-2|AAG38882.1| 507|Caenorhabditis elegans Hypothetical pr... 27 8.5
U23516-1|AAL11101.1| 464|Caenorhabditis elegans Hypothetical pr... 27 8.5
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 8.5
>Z81041-14|CAN99675.1| 684|Caenorhabditis elegans Hypothetical
protein C27A7.5e protein.
Length = 684
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +1
Query: 295 VLVIYTGGTIGMVYNEEGVLAPEKYVFEPLIRRFPQLHDQELWKQRCSDPDFDQSFLILP 474
VLV+YTGGTIGM +GV P ++R P L+D+ ++ S+ LP
Sbjct: 93 VLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRP--YSLP 149
Query: 475 KTNDLNVRIXYKIYEYETLL 534
++ R+ Y I EYE LL
Sbjct: 150 PVRNMKKRVVYWIVEYEPLL 169
>Z81041-13|CAN99674.1| 647|Caenorhabditis elegans Hypothetical
protein C27A7.5d protein.
Length = 647
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +1
Query: 295 VLVIYTGGTIGMVYNEEGVLAPEKYVFEPLIRRFPQLHDQELWKQRCSDPDFDQSFLILP 474
VLV+YTGGTIGM +GV P ++R P L+D+ ++ S+ LP
Sbjct: 56 VLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRP--YSLP 112
Query: 475 KTNDLNVRIXYKIYEYETLL 534
++ R+ Y I EYE LL
Sbjct: 113 PVRNMKKRVVYWIVEYEPLL 132
>Z81041-5|CAB02790.1| 715|Caenorhabditis elegans Hypothetical
protein C27A7.5c protein.
Length = 715
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +1
Query: 295 VLVIYTGGTIGMVYNEEGVLAPEKYVFEPLIRRFPQLHDQELWKQRCSDPDFDQSFLILP 474
VLV+YTGGTIGM +GV P ++R P L+D+ ++ S+ LP
Sbjct: 124 VLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRP--YSLP 180
Query: 475 KTNDLNVRIXYKIYEYETLL 534
++ R+ Y I EYE LL
Sbjct: 181 PVRNMKKRVVYWIVEYEPLL 200
>Z81041-3|CAB02791.1| 713|Caenorhabditis elegans Hypothetical
protein C27A7.5a protein.
Length = 713
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +1
Query: 295 VLVIYTGGTIGMVYNEEGVLAPEKYVFEPLIRRFPQLHDQELWKQRCSDPDFDQSFLILP 474
VLV+YTGGTIGM +GV P ++R P L+D+ ++ S+ LP
Sbjct: 122 VLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRP--YSLP 178
Query: 475 KTNDLNVRIXYKIYEYETLL 534
++ R+ Y I EYE LL
Sbjct: 179 PVRNMKKRVVYWIVEYEPLL 198
>Z83237-6|CAE17879.1| 549|Caenorhabditis elegans Hypothetical
protein R06B9.6 protein.
Length = 549
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 21 RLEVERSVHKYIYLYNNSVIIRYYTFAILKKIQYGTK*LHGYKRRN 158
RL+VE ++++ +L +++ +T A QYG LHG + R+
Sbjct: 430 RLKVEGVIYRFKFLMLFTLLCSAFTIAAYFMKQYGEAQLHGDEARD 475
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 381 GLEYIFLRCEYPLFIINHTNCTACI 307
G+ FL P+F +N +N T+C+
Sbjct: 4 GISIFFLFLHIPIFFVNCSNSTSCV 28
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 381 GLEYIFLRCEYPLFIINHTNCTACI 307
G+ FL P+F +N +N T+C+
Sbjct: 4 GISIFFLFLHIPIFFVNCSNSTSCV 28
>U23516-2|AAG38882.1| 507|Caenorhabditis elegans Hypothetical
protein B0416.5a protein.
Length = 507
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 244 KMDAASQMK-CFGRNDRTVLVIYTGGTIGM 330
+MD S MK CF +L+I GG IGM
Sbjct: 246 QMDFVSGMKSCFSSKQYIILLIVMGGGIGM 275
>U23516-1|AAL11101.1| 464|Caenorhabditis elegans Hypothetical
protein B0416.5b protein.
Length = 464
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 244 KMDAASQMK-CFGRNDRTVLVIYTGGTIGM 330
+MD S MK CF +L+I GG IGM
Sbjct: 203 QMDFVSGMKSCFSSKQYIILLIVMGGGIGM 232
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 381 GLEYIFLRCEYPLFIINHTNCTACI 307
G+ FL P+F +N +N T+C+
Sbjct: 4 GISIFFLFLHIPIFFVNCSNSTSCV 28
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,738,379
Number of Sequences: 27780
Number of extensions: 246068
Number of successful extensions: 750
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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