Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_L15
         (643 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000065ECF0 Cluster: Uncharacterized protein KIAA0350...    34   2.5  
UniRef50_A7PLC6 Cluster: Chromosome chr7 scaffold_20, whole geno...    33   5.9  
UniRef50_Q98QZ3 Cluster: Putative uncharacterized protein MYPU_2...    33   7.7  

>UniRef50_UPI000065ECF0 Cluster: Uncharacterized protein KIAA0350.;
           n=1; Takifugu rubripes|Rep: Uncharacterized protein
           KIAA0350. - Takifugu rubripes
          Length = 773

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 466 ALYYACAHKHVLSLF-RFMDYQTTTMLKKFIRFLK-ISLLTRVNRTHFFFNKLNTNQLLY 639
           +LYY  ++ HV S+     D+    ++  +I FLK +SL    +  HFF+N+   +  LY
Sbjct: 106 SLYYLLSNNHVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALY 165


>UniRef50_A7PLC6 Cluster: Chromosome chr7 scaffold_20, whole genome
           shotgun sequence; n=4; Vitis vinifera|Rep: Chromosome
           chr7 scaffold_20, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 279

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = -3

Query: 416 VCNQYSGAFSRRAVKMEYFSYIFKRKFGCNF*CRETILTITALGVGHNSGAGSLRVLAPR 237
           +CN  + A S +   ME      +R F CNF C+    T  ALG GH +     R +A R
Sbjct: 77  LCNSLNMASSPKTKMMEREKQSDRRVFSCNF-CKREFSTSQALG-GHQNAHKQERAMAKR 134


>UniRef50_Q98QZ3 Cluster: Putative uncharacterized protein
           MYPU_2170; n=1; Mycoplasma pulmonis|Rep: Putative
           uncharacterized protein MYPU_2170 - Mycoplasma pulmonis
          Length = 368

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 328 LHPNFRLKI*LKYSILTARLLKAPEYW-LHTGATRAKAASGCDAFSQALYYACAH 489
           L+PN   KI  KY ILT ++ K PE W +  G++  K     D F +AL+ A A+
Sbjct: 203 LNPNLYAKI--KYEILTRKIEKLPEKWYVALGSSNEKQ----DRFEKALFAALAN 251


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,330,477
Number of Sequences: 1657284
Number of extensions: 12203545
Number of successful extensions: 29721
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29709
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)