Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_L13
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39851-12|AAV58884.1|  137|Caenorhabditis elegans Hypothetical p...    89   3e-18
U39851-11|AAV58883.1|  171|Caenorhabditis elegans Hypothetical p...    89   3e-18
U39851-10|AAM22035.1|  144|Caenorhabditis elegans Hypothetical p...    89   3e-18
Z81047-6|CAB02833.2|  381|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z92838-6|CAB07411.1|   84|Caenorhabditis elegans Hypothetical pr...    28   5.0  

>U39851-12|AAV58884.1|  137|Caenorhabditis elegans Hypothetical
           protein C23G10.2c protein.
          Length = 137

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 41/83 (49%), Positives = 56/83 (67%)
 Frame = +2

Query: 29  GVGAQTRQVLENLKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPKNCPARAT 208
           GV  QT Q L+NL  V++A G    +V+KTT+LL N+ DF  VN++Y +YF    PARA 
Sbjct: 50  GVVEQTHQSLKNLGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAA 109

Query: 209 YQVTKLPLNAAVEIEAIALSGDL 277
           YQV  LP    VEIEA+A++G++
Sbjct: 110 YQVAALPKGGLVEIEAVAIAGEI 132


>U39851-11|AAV58883.1|  171|Caenorhabditis elegans Hypothetical
           protein C23G10.2a protein.
          Length = 171

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 41/83 (49%), Positives = 56/83 (67%)
 Frame = +2

Query: 29  GVGAQTRQVLENLKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPKNCPARAT 208
           GV  QT Q L+NL  V++A G    +V+KTT+LL N+ DF  VN++Y +YF    PARA 
Sbjct: 84  GVVEQTHQSLKNLGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAA 143

Query: 209 YQVTKLPLNAAVEIEAIALSGDL 277
           YQV  LP    VEIEA+A++G++
Sbjct: 144 YQVAALPKGGLVEIEAVAIAGEI 166


>U39851-10|AAM22035.1|  144|Caenorhabditis elegans Hypothetical
           protein C23G10.2b protein.
          Length = 144

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 41/83 (49%), Positives = 56/83 (67%)
 Frame = +2

Query: 29  GVGAQTRQVLENLKHVVEAGGGSLESVIKTTILLANMDDFQCVNQIYAEYFPKNCPARAT 208
           GV  QT Q L+NL  V++A G    +V+KTT+LL N+ DF  VN++Y +YF    PARA 
Sbjct: 57  GVVEQTHQSLKNLGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAA 116

Query: 209 YQVTKLPLNAAVEIEAIALSGDL 277
           YQV  LP    VEIEA+A++G++
Sbjct: 117 YQVAALPKGGLVEIEAVAIAGEI 139


>Z81047-6|CAB02833.2|  381|Caenorhabditis elegans Hypothetical
           protein C41G6.8 protein.
          Length = 381

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = -3

Query: 635 LLYELYDVLYDIYKYTYKISTK 570
           L Y+ YD  YDIYK  Y ISTK
Sbjct: 17  LAYD-YDTDYDIYKTIYNISTK 37


>Z92838-6|CAB07411.1|   84|Caenorhabditis elegans Hypothetical
           protein T03D8.7 protein.
          Length = 84

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -1

Query: 649 WLCTNCYTNCMMCYM 605
           W C  CY  C  CYM
Sbjct: 44  WCCPGCYDTCSNCYM 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,546,795
Number of Sequences: 27780
Number of extensions: 264339
Number of successful extensions: 602
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)