Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L12
(192 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1620.06c |||ribose-phosphate pyrophosphokinase |Schizosaccha... 35 0.001
SPBC428.17c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.085
SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase Prs1|Schizo... 27 0.34
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 26 0.79
SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 24 2.4
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 24 3.2
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 24 3.2
SPCC736.05 |wtf7||wtf element Wtf7|Schizosaccharomyces pombe|chr... 23 5.6
SPBC244.01c |sid4||SIN component scaffold protein Sid4 |Schizosa... 23 5.6
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 23 5.6
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 23 7.4
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 23 7.4
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 23 7.4
SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein homolog|Schizos... 22 9.8
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 22 9.8
>SPCC1620.06c |||ribose-phosphate pyrophosphokinase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 321
Score = 35.1 bits (77), Expect = 0.001
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +1
Query: 106 NIKVFTGSSHPEIAXKIVARLGI 174
+IK+F G+SHPE+A K+ R+G+
Sbjct: 5 SIKIFAGNSHPELAEKVARRIGL 27
>SPBC428.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 602
Score = 29.1 bits (62), Expect = 0.085
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 31 NPDETTSKEDNKKQRAFNNPNSRMPNIKV 117
+P +T SK +KKQR +NP+ +P+ V
Sbjct: 39 SPGQTVSKRLHKKQRVVSNPDLSLPSSPV 67
>SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase
Prs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 27.1 bits (57), Expect = 0.34
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 100 MPNIKVFTGSSHPEIAXKIVARLGIDP 180
M + + G SHPE+ I RLGI P
Sbjct: 1 MKSATIIGGGSHPELLHLISNRLGITP 27
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 25.8 bits (54), Expect = 0.79
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 88 PNSRMPNIKVFTGSSHPEIAXKIVARLGI 174
PNS+ + +GSSHP + ++ R +
Sbjct: 20 PNSKSSRLSSTSGSSHPSSSSRLTVRSAV 48
>SPAC1A6.09c |lag1||sphingosine N-acyltransferase
Lag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 24.2 bits (50), Expect = 2.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 85 C*KPFVFYYLLCLWF 41
C + + F+Y LC WF
Sbjct: 156 CEQGYSFFYYLCFWF 170
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 23.8 bits (49), Expect = 3.2
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +1
Query: 1 VRFTIKFTXMNPDETTSKEDNKKQRAFNNPNSRMPNIKVFTGSSHPEIAXKI 156
V+ T+ T + E NKK ++ P +K+FT P A +
Sbjct: 935 VKSTVLNTTLRIYEADRALKNKKTQSLKKPFGNQATLKIFTEVQMPMEALSV 986
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 23.8 bits (49), Expect = 3.2
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 10 TIKFTXMNPDETTSKEDNKKQRAFNNPN 93
T KF +PD K++ + R NPN
Sbjct: 178 TEKFAASHPDRLQIKKNARVTRLLTNPN 205
>SPCC736.05 |wtf7||wtf element Wtf7|Schizosaccharomyces pombe|chr
3|||Manual
Length = 220
Score = 23.0 bits (47), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 76 PFVFYYLLCLWFRQGS 29
PF F + CL+FR+ S
Sbjct: 128 PFNFIFFACLFFRKAS 143
>SPBC244.01c |sid4||SIN component scaffold protein Sid4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 23.0 bits (47), Expect = 5.6
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 37 DETTSKEDNKKQRAFNNPNSRMPNIKVFTGSSH 135
+ TT KE+ KK+ + N ++R+P ++ GS++
Sbjct: 71 NSTTIKENTKKEISNPNDSTRLP-LEQIPGSNN 102
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 23.0 bits (47), Expect = 5.6
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +1
Query: 22 TXMNPDETTSKEDNKKQRAFNNPNSRMPNIKVFTGSSHPEIAXKIVARL 168
T + ++ S ED K + PN + ++ EIA K + R+
Sbjct: 590 TGNSTNKEASTEDTKANATASAPNKKKKTVETLQQQVIKEIARKEIPRV 638
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 22.6 bits (46), Expect = 7.4
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +1
Query: 34 PDETTSKEDNKKQRAFNNPNSRMPNIKVFTGSSH 135
P + + + K++R ++ NSR +I++ SH
Sbjct: 490 PTRSDNPPNEKRRRTSSSENSRALDIQLSASDSH 523
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 22.6 bits (46), Expect = 7.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 130 SSL*TL*CSAFLNLDC*KPFVFY 62
SSL L C AF++L C PF +
Sbjct: 719 SSLLILACYAFVSLICMDPFFIF 741
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 22.6 bits (46), Expect = 7.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 76 AFNNPNSRMPNIKVFTGSSHPEIAXKIVA 162
A +NPN+R N F G+ H E + + +
Sbjct: 1820 AGSNPNARNNNNPYFYGNLHTESSLSLAS 1848
>SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 196
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 37 DETTSKEDNKKQRAFNNPNSRMP 105
D+T S D+KK +N P ++ P
Sbjct: 130 DKTYSSIDSKKDFKYNFPKTQAP 152
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 22.2 bits (45), Expect = 9.8
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +3
Query: 84 QSKFKNAEHQSVYRELSSGDCEXNCCKARN*P 179
QSK +NAE + V E C N P
Sbjct: 367 QSKIRNAEDEDVMDSQYGSKIEDTPCSLHNVP 398
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,496
Number of Sequences: 5004
Number of extensions: 9301
Number of successful extensions: 41
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 2,362,478
effective HSP length: 43
effective length of database: 2,147,306
effective search space used: 42946120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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