Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L10
(336 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1121 + 8893177-8893199,8893260-8893287,8893656-8893730,889... 29 0.71
12_02_0411 - 18730224-18730574 28 1.6
05_03_0561 - 15476484-15476649,15476814-15476893,15476971-154770... 28 1.6
01_06_0287 + 28224956-28225216,28225385-28225641,28225789-282258... 28 1.6
03_06_0459 + 34085134-34086269,34086471-34086717 28 2.2
02_05_0118 - 25991356-25991686,25991797-25992092,25992405-259931... 28 2.2
02_05_0113 - 25941189-25941519,25941630-25941925,25942238-259429... 28 2.2
11_03_0022 - 9015408-9015467,9015468-9015560,9017326-9017420,901... 27 2.9
09_02_0384 - 8294914-8297817 27 2.9
05_03_0411 - 13622241-13622591,13622838-13623476,13624031-136241... 27 2.9
02_04_0452 + 23044190-23045227 27 5.0
06_03_0408 - 20485027-20486598 26 6.6
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 26 6.6
04_04_1478 - 33882625-33883639,33883725-33883849,33883935-338841... 26 6.6
02_05_0567 + 30029862-30030136,30030299-30030384,30031663-300318... 26 6.6
01_06_0285 + 28183108-28183209,28183495-28183754,28183950-281842... 26 6.6
10_02_0154 - 5923251-5923604,5924167-5925567,5925639-5925986 26 8.7
09_02_0523 + 10196272-10196375,10196551-10197488,10200247-102008... 26 8.7
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 26 8.7
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 26 8.7
06_01_0821 + 6210368-6211285 26 8.7
03_01_0505 - 3796390-3796542,3798438-3798617 26 8.7
>01_01_1121 +
8893177-8893199,8893260-8893287,8893656-8893730,
8894748-8894813,8894917-8894959,8895102-8895150,
8895899-8895992,8896078-8896130,8896921-8897005,
8897242-8897344,8897421-8897513,8897985-8898051,
8898309-8898375,8898463-8898516,8898632-8898766
Length = 344
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 193 CRLTVECTLECP*GGPRPF 137
CR+TVE + CP GPR F
Sbjct: 94 CRVTVELAIPCPKSGPRVF 112
>12_02_0411 - 18730224-18730574
Length = 116
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +3
Query: 9 EGDWLGANDEPLKGFKWR----GGSERETTGLLLWS 104
+GDW+ ++ L G +WR GG + E GLL W+
Sbjct: 38 DGDWVSWSEMGL-GNRWRIGGGGGGDGEINGLLAWA 72
>05_03_0561 -
15476484-15476649,15476814-15476893,15476971-15477030,
15477117-15477210,15477287-15477421,15477601-15477656,
15478359-15478460,15478544-15478651,15479206-15479283,
15479432-15479521,15480061-15480123
Length = 343
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 240 LSRFSIYQIILRKMNWSICEVFTDYVSTGP 329
L++F I++ ++K+ S+CE F DY P
Sbjct: 250 LNKFDIFEKKIQKVPLSVCEWFKDYQPIAP 279
>01_06_0287 +
28224956-28225216,28225385-28225641,28225789-28225899,
28225926-28226021,28226078-28226134,28226348-28226438,
28226610-28226678,28227091-28227180,28227390-28227440,
28227535-28227753,28228064-28228127,28228211-28228299
Length = 484
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +2
Query: 56 MAWRLGERNNWPAVMVTAFQGNVAQRVKRSWSSSWTLKGTFDSESTVRDNATVFGLSTXI 235
+ W+ E W +++ +QG + + R + S W +K + SE T + A L
Sbjct: 341 LLWK--EELTWNQMLIRRYQGRESLWIHRIFLSQWWVKFSLSSEET--ECAAGTSLVDLF 396
Query: 236 SSVQIFHLSD 265
+ +I+ LSD
Sbjct: 397 LAQEIYLLSD 406
>03_06_0459 + 34085134-34086269,34086471-34086717
Length = 460
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 54 KWRGGSERETTGLLLWSQPF 113
+WRGG E G L WS P+
Sbjct: 440 RWRGGEEEVGGGALAWSPPW 459
>02_05_0118 -
25991356-25991686,25991797-25992092,25992405-25993109,
25993197-25993298,25993519-25993846,25994337-25994461,
25994555-25994628,25995110-25995191,25995278-25995391,
25995475-25995575,25995663-25995752,25996316-25996562
Length = 864
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 85 VVSLSEPPRHLKPFNGSSFAPSQSPS 8
++ L EP + LK G SFAP Q P+
Sbjct: 823 LIGLQEPGQVLKEMFGLSFAPQQQPT 848
>02_05_0113 -
25941189-25941519,25941630-25941925,25942238-25942942,
25943030-25943131,25943352-25943679,25944170-25944294,
25944388-25944453,25945046-25945109,25945739-25945821,
25945917-25945943
Length = 708
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 85 VVSLSEPPRHLKPFNGSSFAPSQSPS 8
++ L EP + LK G SFAP Q P+
Sbjct: 667 LIGLQEPGQVLKEMFGLSFAPQQQPT 692
>11_03_0022 -
9015408-9015467,9015468-9015560,9017326-9017420,
9018019-9018079,9018601-9018620,9018743-9018824,
9018919-9019020,9019116-9019532
Length = 309
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 64 EARREKQLACCYGHSLSRQRCPTGEKVVVLLMDTQGYIR 180
E RREK++A GH + + EK ++ + TQG +R
Sbjct: 166 EGRREKRMAAEKGHVIPTNHLDSKEKELIKIA-TQGVVR 203
>09_02_0384 - 8294914-8297817
Length = 967
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/67 (22%), Positives = 35/67 (52%)
Frame = +2
Query: 125 AQRVKRSWSSSWTLKGTFDSESTVRDNATVFGLSTXISSVQIFHLSDYIEEDELEHLRGI 304
+ R KR+W TFD + + + + + ++ +S+++I + D +E D+L+
Sbjct: 350 SMRAKRTWREWENALSTFDESTQLLEASEMKVINPILSTLRISY--DNLENDQLKE---C 404
Query: 305 YRLCVHW 325
+ +C+ W
Sbjct: 405 FLVCLLW 411
>05_03_0411 -
13622241-13622591,13622838-13623476,13624031-13624177,
13624364-13624486,13624609-13624784,13625168-13625444
Length = 570
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 147 GPPHGHSRVHSTVSRQSETTQPSSACPHXY 236
G PH +SR+ R + P AC + Y
Sbjct: 38 GTPHAYSRISPASHRPLSSLNPGRACAYAY 67
>02_04_0452 + 23044190-23045227
Length = 345
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 90 LLLWSQPFKATLPNG*KGRGPPHGHSRVHSTVSRQSETTQPSSACP 227
LL+ S P L + G G H HS HS + +T+P ++ P
Sbjct: 159 LLMSSSPHGCLLLHH-AGHGHGHAHSHSHSHSRAHNPSTRPPTSAP 203
>06_03_0408 - 20485027-20486598
Length = 523
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1
Query: 222 KPKTVALSRTVDSLSNVPLSVHEEDHDLFTRW 127
K K VA+ TV ++ NVP++V + D+ TRW
Sbjct: 240 KVKLVAVPPTV-TVFNVPVTVSQGAIDVVTRW 270
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 144 RGPPHGHSRVHSTVSRQSETTQPS 215
R PP G SR S R++E+T PS
Sbjct: 203 RPPPGGRSRGRSRHPRKAESTSPS 226
>04_04_1478 -
33882625-33883639,33883725-33883849,33883935-33884144,
33884645-33884650
Length = 451
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 88 PVVSLSEPPRHLKPFNGSSFAPSQSPSV 5
P V+++ PP N S PS SPSV
Sbjct: 304 PSVAMNHPPSSSPAMNFGSALPSSSPSV 331
>02_05_0567 +
30029862-30030136,30030299-30030384,30031663-30031811,
30032581-30032685,30032779-30032895,30033251-30033394,
30033519-30033668
Length = 341
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 18 WLGA-NDEPLKGFKWRGGSERETTGLLLWSQPFKATLP 128
W A E + WRGGS+ ++GL++ + K +P
Sbjct: 163 WTSAFQSEGSPAYSWRGGSQGSSSGLIV-KKTMKVDIP 199
>01_06_0285 +
28183108-28183209,28183495-28183754,28183950-28184237,
28184385-28184495,28184815-28184905,28185146-28185214,
28185627-28185716,28185887-28185937,28186040-28186258,
28186371-28186490
Length = 466
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +2
Query: 56 MAWRLGERNNWPAVMVTAFQGNVAQRVKRSWSSSWTLKGTFDSEST 193
+ W+ E W ++ +QG + + R + S W +K SE T
Sbjct: 334 LLWK--EELTWNEKLIRRYQGRESLWIHRRFLSQWWMKFLLSSEET 377
>10_02_0154 - 5923251-5923604,5924167-5925567,5925639-5925986
Length = 700
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 65 RLGERNNWPAVMVTAFQGNVAQRVKRSWSSS 157
R G WP ++T+F V +R WS S
Sbjct: 329 RRGRAWEWPLHIITSFSRRVHPASRRLWSGS 359
>09_02_0523 +
10196272-10196375,10196551-10197488,10200247-10200896,
10201003-10201746
Length = 811
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 72 ERETTGLLL-WSQPFKATLPNG*KGRGPPHGHSRVHSTVSRQSETTQPSSACPHXYHLSR 248
+R+ TG+LL W++ G+G HG + +H VS +P + P+ YH
Sbjct: 346 QRDATGMLLNWNRDLT--------GKGDSHGRTPLHFAVS-----IEPPTKIPY-YHKIL 391
Query: 249 FSIYQII 269
FSI + I
Sbjct: 392 FSIMRHI 398
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 38 TIKRFQMAWRLGERNNWPAVMV----TAFQGNVAQRVKRSWSSSW 160
T+ + +L E+ W +V V TAF V V++SW+ W
Sbjct: 574 TLNQHGFLGQLQEKKLWTSVSVRSDSTAFANFVVVSVRQSWAPHW 618
>07_03_0627 -
20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 102 SQPFKATLPNG*KGRGPPHGHSRVHSTVSRQSETTQPSSA 221
S+ F TL G GPPH H + + PSSA
Sbjct: 12 SEIFHLTLDYGDLADGPPHHHQQQPPPPQQPGSPPTPSSA 51
>06_01_0821 + 6210368-6211285
Length = 305
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +3
Query: 51 FKWRGGSERETTGLLLWSQPFKATLPNG*KGRG---PPHG 161
+ W G +ER+ G W PF A P G KG PP+G
Sbjct: 174 YAWAGDAERQCPGQCAW--PF-AKPPYGPKGEAALVPPNG 210
>03_01_0505 - 3796390-3796542,3798438-3798617
Length = 110
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -1
Query: 255 WKIWTDDXNVDKPKTVALSRTVDSLSNVPLSVHEEDHDLFTRWATL 118
W +W+ + V SR + N S+H+E DL R + L
Sbjct: 46 WTVWSIGAPAMDSQVVPSSRVLQETCNYIRSLHQEVDDLSERLSEL 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,897,114
Number of Sequences: 37544
Number of extensions: 233611
Number of successful extensions: 749
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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