Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L10
(336 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37041| Best HMM Match : GBP (HMM E-Value=0) 63 6e-11
SB_9615| Best HMM Match : GBP (HMM E-Value=2.8e-22) 29 1.2
SB_32063| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_56046| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_47826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 27 5.0
SB_18359| Best HMM Match : UPF0171 (HMM E-Value=1e-09) 26 6.6
SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_38437| Best HMM Match : VWA (HMM E-Value=0) 26 8.7
SB_1250| Best HMM Match : 7tm_1 (HMM E-Value=6e-05) 26 8.7
SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07) 26 8.7
SB_33152| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_30460| Best HMM Match : DSPc (HMM E-Value=2.5e-38) 26 8.7
>SB_37041| Best HMM Match : GBP (HMM E-Value=0)
Length = 466
Score = 62.9 bits (146), Expect = 6e-11
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +3
Query: 15 DWLGANDEPLKGFKWRGGSERETTGLLLWSQPFKATLPNG 134
DWLG E L+GF WRGGSER+TTG+L+W++P+ P+G
Sbjct: 5 DWLGGETEALEGFSWRGGSERDTTGILMWNKPYICKRPDG 44
Score = 40.7 bits (91), Expect = 3e-04
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 167 KGTFDSESTVRDNATVFGLSTXISSVQIF 253
+G FDS STV+D AT+F LST SS Q+F
Sbjct: 55 QGAFDSSSTVKDCATIFALSTMTSSTQLF 83
Score = 30.3 bits (65), Expect = 0.41
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 127 PTGEKVVVLLMDTQG 171
P GE+VVVLLMDTQG
Sbjct: 42 PDGEEVVVLLMDTQG 56
>SB_9615| Best HMM Match : GBP (HMM E-Value=2.8e-22)
Length = 621
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 167 KGTFDSESTVRDNATVFGLSTXISSVQIFHLSDYIEEDELEHLRGIYRLC 316
+GT S+S +++ + L+ +SSV I++ +LE L + +LC
Sbjct: 213 EGTKASQSQQKEDDVIVTLTLLLSSVLIYNSEGVPTASDLEQLNHVIKLC 262
>SB_32063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 97 NSRPVVSLSE-PPRHLKPFNGSSFAPSQSP 11
N+ PV+ LS P HL P S F P+ P
Sbjct: 8 NTYPVIDLSRFVPSHLPPIGHSRFVPAHLP 37
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 3 NTEGDWLGANDEPLKGFKWRGGSERETTGL 92
N EG W ++ PL W GG + G+
Sbjct: 1866 NIEGGWQWSDGSPLAYVAWNGGEPNDLVGV 1895
>SB_56046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -1
Query: 168 LSVHEEDH--DLFTRWATLP*KAVTITAGQLFL 76
+S+H++ H D+ + W T KA+ +T G+ L
Sbjct: 172 ISIHDKGHIRDIVSNWPTTEVKAIVMTDGERIL 204
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -3
Query: 211 GCVVSDCRLTVE-CTLECP*GG 149
GC++S C +VE CT+ CP GG
Sbjct: 358 GCIMS-CSSSVENCTMSCPGGG 378
>SB_47826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 99 WSQPFKATLPNG*KGRGPPHGHSRVHSTVSRQSETTQPSSA 221
W+ P TLP+ GP +RVH Q+ Q ++A
Sbjct: 221 WNPPLLGTLPDDFLRLGPSSMQARVHPNPPSQTTPKQQTTA 261
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 261 DRWKIWTDDXNVDKPKTVALSRTVDSLSNVPLSVHEEDHDLFTR 130
DR+ W D K K +L+ T+ LSN + ++ +L TR
Sbjct: 185 DRFSHWKKDVRDWKEKNNSLTNTMRELSNTIGQLQAKEQELSTR 228
>SB_18359| Best HMM Match : UPF0171 (HMM E-Value=1e-09)
Length = 557
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 186 SLSNVPLSVHEEDHDLFTRWATLP 115
S+ VP + +EED LF R TLP
Sbjct: 485 SIHRVPAAKNEEDLKLFARTRTLP 508
>SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -3
Query: 142 PFHPLGNV--ALKGCDHNSRPVVSLSEP 65
PFH N+ LKG D RP+++ S+P
Sbjct: 398 PFHFFRNIWHHLKGDDKEKRPILTTSQP 425
>SB_38437| Best HMM Match : VWA (HMM E-Value=0)
Length = 3445
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -2
Query: 326 PSGHIVCKYLANAPVHLPQYNLIDGKSGQMIXMW 225
P+G + + L N+ ++ P +D K+ I MW
Sbjct: 1491 PAGSVQLRGLPNSYIYYPNRGRLDTKNSITIAMW 1524
>SB_1250| Best HMM Match : 7tm_1 (HMM E-Value=6e-05)
Length = 247
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 332 SWPSGHIVCKYLANAPV 282
SWP G ++C+ L+ PV
Sbjct: 85 SWPLGGVMCRLLSTVPV 101
>SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07)
Length = 272
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 103 DHNSRPVVSLSEPPRHLKPFNGS 35
DH RP+ + PPR L P G+
Sbjct: 159 DHIHRPIFRRAPPPRDLTPLPGN 181
>SB_33152| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 108 PFKATLPNG*KGRGPPHGHSRVHSTVSRQSETTQPSSA 221
P KAT+P G G G P R + + S + P SA
Sbjct: 128 PIKATVPFGQIGDGSPTATERSITPIQTSSFSYDPESA 165
>SB_30460| Best HMM Match : DSPc (HMM E-Value=2.5e-38)
Length = 550
Score = 25.8 bits (54), Expect = 8.7
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Frame = -3
Query: 223 QAEDGCVVSDCRLT-VECTLECP*GGPRPF--------HPLGNVALKGCDHNSRPVVSLS 71
+A GCVV C L T C R F +PL + C ++ RP +S
Sbjct: 37 RARQGCVVVACTLVNTSRTQLCEGERGRGFVGHLLSMYNPLCSTIASTCRYSWRPKISRE 96
Query: 70 EPPRHLKPFNGS 35
P RHL + S
Sbjct: 97 IPIRHLSSYYSS 108
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,243,141
Number of Sequences: 59808
Number of extensions: 270004
Number of successful extensions: 790
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 473307974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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