Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L10
(336 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 0.99
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 1.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 2.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 3.0
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 4.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.3
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 20 7.0
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 20 7.0
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 20 7.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 20 7.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 9.2
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 0.99
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 104 TAFQGNVAQRVKRSWSSSW 160
T FQ N + +KRS S SW
Sbjct: 689 THFQVNQSHGIKRSGSHSW 707
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 1.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 156 HGHSRVHSTVSRQSETTQPSSACPHXYH 239
HGHS +H+T +A PH H
Sbjct: 421 HGHSHIHATPHHH----HSHAATPHHQH 444
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 2.3
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +3
Query: 153 PHGHSRVHSTVSRQSETTQPSSACPHXYHLSRFSIYQIILRKMNWSICEVFTDYVST 323
PH S H + T P+ PH +H + Q + + ++ E ++ YV++
Sbjct: 328 PHRGSSPHH--QHGNHTMGPTMGPPHHHHHHQTQSLQHLHYRQPPTLSESYSSYVNS 382
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 3.0
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 129 NG*KGR-GPPHGHSRVHSTVSRQSETTQP 212
NG G GPP GH S SR + P
Sbjct: 1753 NGHSGTMGPPVGHPTNASAHSRSGSQSMP 1781
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.0 bits (42), Expect = 4.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 76 EKQLACCYGHSLS 114
+K L CC HSLS
Sbjct: 140 QKNLQCCGVHSLS 152
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 20.6 bits (41), Expect = 5.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -2
Query: 266 NLIDGKSGQMIXMWTSRRRLRCLGLSTHCRMY 171
+L DG I + T+ RR+ + T+C ++
Sbjct: 513 SLSDGSYFGEICLLTNARRVASVRAETYCNLF 544
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 20.6 bits (41), Expect = 5.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -2
Query: 266 NLIDGKSGQMIXMWTSRRRLRCLGLSTHCRMY 171
+L DG I + T+ RR+ + T+C ++
Sbjct: 481 SLSDGSYFGEICLLTNARRVASVRAETYCNLF 512
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 20.2 bits (40), Expect = 7.0
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -3
Query: 106 CDHNSRPVVSLSEPPRHLKPFNG 38
C H R V ++ RHL+ G
Sbjct: 40 CSHCDRQFVQVANLRRHLRVHTG 62
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 20.2 bits (40), Expect = 7.0
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = -2
Query: 332 SWPSGHIVCKYLA 294
SW +G ++C+ +A
Sbjct: 103 SWKAGDVMCRIMA 115
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 20.2 bits (40), Expect = 7.0
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = +1
Query: 151 LLMDTQGYIR 180
LL+D+QGY++
Sbjct: 497 LLLDSQGYVK 506
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.2 bits (40), Expect = 7.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 88 PVVSLSEPPR 59
P VSLS PPR
Sbjct: 131 PSVSLSSPPR 140
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 19.8 bits (39), Expect = 9.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 281 ELEHLRGIYRLCVH 322
ELEH RLC+H
Sbjct: 1087 ELEHGAAGLRLCLH 1100
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,909
Number of Sequences: 438
Number of extensions: 2371
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7591023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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