Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L09
(171 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 0.76
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 23 4.1
SPBC2G2.10c |mug110||sequence orphan|Schizosaccharomyces pombe|c... 23 5.4
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 23 5.4
SPAC26H5.07c |||seven transmembrane receptor-like protein|Schizo... 23 7.1
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 23 7.1
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 22 9.4
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 22 9.4
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 22 9.4
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 22 9.4
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 22 9.4
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 22 9.4
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 0.76
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -1
Query: 105 SIDTKLTSSFSGRAEAIAARPKTSNTAALILQPT 4
S+++ +TS+ E +AA+P+ S+TA +PT
Sbjct: 201 SVNSSVTSNPPHTEEPVAAKPEASSTATKGPRPT 234
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 23.4 bits (48), Expect = 4.1
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +1
Query: 10 LQDEGCCVTGFRSGRYC-----LGSS*K**RQLRINGHQTETTIH 129
++ +G C+T F + YC LG+ K + ++ HQ E H
Sbjct: 413 VEHDGYCITVFSAPNYCDSTGNLGAVIKVKEDMELDFHQFEAVPH 457
>SPBC2G2.10c |mug110||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 248
Score = 23.0 bits (47), Expect = 5.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 156 SVTWLSNFKMNSCFCLMSID 97
S T+ N + S FC MSID
Sbjct: 48 SCTYQKNRLLRSIFCCMSID 67
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 23.0 bits (47), Expect = 5.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 86 RHHFQDEPRQ*RPDLKPVTQQPSSCSR 6
RH + P Q P P + +PSS R
Sbjct: 7 RHDSSNIPTQPSPSASPKSNKPSSAQR 33
>SPAC26H5.07c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 505
Score = 22.6 bits (46), Expect = 7.1
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 36 WF*VWPLLPRLVLKMMTSTSYQWTSNRNNYSF 131
WF + LVL +M + Y W NN F
Sbjct: 402 WFLNYGYTDILVLILMLTILYLWRPTENNRRF 433
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 22.6 bits (46), Expect = 7.1
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -2
Query: 74 QDEPRQ*RPDLKPVTQQPSS 15
Q++P Q +P++ ++QP S
Sbjct: 248 QEQPEQAQPEVSAASEQPES 267
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 22.2 bits (45), Expect = 9.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 141 SNFKMNSCFCLMSIDTKLTSSFSGRAEAIA 52
SN N LMSIDT+L + R AIA
Sbjct: 866 SNTGFNVKDALMSIDTELQTPSDQRLFAIA 895
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 22.2 bits (45), Expect = 9.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 83 HHFQDEPRQ*RPDLKPVTQQPSSCSRQ 3
H+F + + P+ +PVTQQP+S Q
Sbjct: 418 HYFPVDELEQVPE-QPVTQQPASVDPQ 443
>SPAC29B12.10c |||OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 22.2 bits (45), Expect = 9.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 91 VDVIIFRTSRGNSG 50
V ++FRT GNSG
Sbjct: 297 VSTVLFRTLHGNSG 310
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 22.2 bits (45), Expect = 9.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 101 LIRS*RHHFQDEPRQ*R 51
++R+ RHH+QD P R
Sbjct: 1011 VLRNKRHHYQDLPESVR 1027
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 22.2 bits (45), Expect = 9.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 96 TKLTSSFSGRAEAIAARPKTSNTAA 22
+KL + F G I+ RP S ++A
Sbjct: 433 SKLNAEFDGHVNNISVRPPGSGSSA 457
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 22.2 bits (45), Expect = 9.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 93 KLTSSFSGRAEAIAARPKTSNT 28
K SSFSG + + RP T+ T
Sbjct: 632 KRFSSFSGSSSKLPVRPSTALT 653
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,621
Number of Sequences: 5004
Number of extensions: 8157
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 2,362,478
effective HSP length: 37
effective length of database: 2,177,330
effective search space used: 41369270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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