Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_L08
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    25   0.64 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.1  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -1

Query: 596 LPSSGTPLYCFIAFKASALLSNTTSAVPKDLPDLS 492
           LPS  +   CF   K  + L N  S  P  LP +S
Sbjct: 171 LPSPASDSECFDRRKFISALVNAPSVSPASLPSIS 205


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 505  RSLGTADVVFERRADALKAMKQYNGVPL 588
            R +GT DV F++R   L A     G P+
Sbjct: 1429 RQIGTLDVAFKKRFAKLNANGTNAGTPV 1456


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 505  RSLGTADVVFERRADALKAMKQYNGVPL 588
            R +GT DV F++R   L A     G P+
Sbjct: 1429 RQIGTLDVAFKKRFAKLNANGTNAGTPV 1456


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 505  RSLGTADVVFERRADALKAMKQYNGVPL 588
            R +GT DV F++R   L A     G P+
Sbjct: 1429 RQIGTLDVAFKKRFAKLNANGTNAGTPV 1456


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 505  RSLGTADVVFERRADALKAMKQYNGVPL 588
            R +GT DV F++R   L A     G P+
Sbjct: 1429 RQIGTLDVAFKKRFAKLNANGTNAGTPV 1456


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 295 TRGDVNSTWKHDMFN 339
           TRGDV ST    +FN
Sbjct: 124 TRGDVTSTTIKKLFN 138


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 6   LELLVCSKVIIFYVEINLYLKIIVFY 83
           + LL C   IIF + +   L I  FY
Sbjct: 264 MHLLFCCAFIIFTMHLLFLLCIYYFY 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,248
Number of Sequences: 336
Number of extensions: 2824
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)