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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_L08
         (596 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces ...    57   2e-09
SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|ch...    46   3e-06
SPAC328.05 |||RNA-binding protein involved in export of mRNAs|Sc...    46   6e-06
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce...    43   3e-05
SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101 |Sch...    42   5e-05
SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|ch...    40   3e-04
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces...    40   4e-04
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ...    36   0.006
SPBC29A3.07c |||U2 snRNP-associated protein Sf3b14 homolog |Schi...    36   0.006
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces...    34   0.014
SPCC126.11c |||RNA-binding protein, rrm type|Schizosaccharomyces...    34   0.014
SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyce...    33   0.024
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar...    33   0.024
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po...    33   0.032
SPBC18H10.03 |tif35||translation initiation factor eIF3g|Schizos...    32   0.073
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra...    31   0.097
SPBC4B4.07c |usp102|mud1|U1 snRNP-associated protein Usp102|Schi...    30   0.29 
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr...    29   0.52 
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar...    29   0.68 
SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding p...    28   0.90 
SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|ch...    28   1.2  
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S...    27   2.1  
SPAC3F10.06c |||initiator methionine tRNA 2'-O-ribosyl phosphate...    26   3.6  
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo...    26   3.6  
SPBC15D4.11c |||sequence orphan|Schizosaccharomyces pombe|chr 2|...    26   4.8  
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce...    25   8.4  

>SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 199

 Score = 56.8 bits (131), Expect = 2e-09
 Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +1

Query: 373 AITTGPSKLLVSNLDFGVSDSDIQELF-SEFGILKSAAVHYDRSGRSLGTADVVFERRAD 549
           ++ +  SK++VSNL   V+++ ++ELF    G  K  ++ Y  +GRS G A ++F R  D
Sbjct: 49  SVISEESKIIVSNLPTDVTEAQVKELFVKSIGPCKRVSLAYGPNGRSKGIATIIFSRPGD 108

Query: 550 ALKAMKQYNGVPLDG 594
           A +A +QY G  +DG
Sbjct: 109 ATRAYEQYEGRLVDG 123


>SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 274

 Score = 46.4 bits (105), Expect = 3e-06
 Identities = 25/64 (39%), Positives = 34/64 (53%)
 Frame = +1

Query: 403 VSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYNGV 582
           V NL + V + D+  LF  F  ++   ++YDR+GRS G+ DV FE   DA  A K     
Sbjct: 89  VENLHYQVLEKDVLSLFENFHPIR-VIMNYDRAGRSEGSCDVYFETSQDAEDAQKTLQST 147

Query: 583 PLDG 594
            L G
Sbjct: 148 NLKG 151


>SPAC328.05 |||RNA-binding protein involved in export of
           mRNAs|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 434

 Score = 45.6 bits (103), Expect = 6e-06
 Identities = 22/66 (33%), Positives = 37/66 (56%)
 Frame = +1

Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYN 576
           + V NL +  SD ++ +LF++ G +  A + Y+ +GRS G   V FE   DA  ++++ N
Sbjct: 282 IYVGNLPWATSDRNLLDLFTDIGSVIRARIAYEPTGRSKGFGVVQFENENDAASSIEKLN 341

Query: 577 GVPLDG 594
           G    G
Sbjct: 342 GYRYGG 347



 Score = 31.1 bits (67), Expect = 0.13
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +1

Query: 412 LDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYNGVPLD 591
           L + V   D+++LF + G +  A +  ++ GRS G   VV     +A+ A++  +     
Sbjct: 190 LPYNVRWQDLKDLFRQAGSVIRADIQMNQEGRSRGIGIVVMSSMKEAMHAIQMLHNTDFM 249

Query: 592 G 594
           G
Sbjct: 250 G 250


>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 604

 Score = 43.2 bits (97), Expect = 3e-05
 Identities = 20/67 (29%), Positives = 35/67 (52%)
 Frame = +1

Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQY 573
           +L VSN+ F ++D D++ +F  FG ++   +  D   RS G   + +     A  A+++ 
Sbjct: 341 RLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKM 400

Query: 574 NGVPLDG 594
           NG  L G
Sbjct: 401 NGFDLAG 407


>SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 261

 Score = 42.3 bits (95), Expect = 5e-05
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +1

Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRSLGTADVVFERRADALKAMKQY 573
           + +S L +   +SDI+  F+ +G ++   V  ++ +G+S+G A VVFER  D   A K  
Sbjct: 102 MFLSRLSYDTKESDIEREFTRYGPIERIRVVRNKVTGKSMGYAFVVFERERDLKVAYKAS 161

Query: 574 NGVPLDG 594
            G+ L+G
Sbjct: 162 AGLMLNG 168


>SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 219

 Score = 39.9 bits (89), Expect = 3e-04
 Identities = 22/62 (35%), Positives = 32/62 (51%)
 Frame = +1

Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQY 573
           +L V NL   V+D  + + FSE+  L    V  DR G++ G   V F+     LKA ++ 
Sbjct: 31  RLFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDREGKTRGFGFVSFKDSDQFLKAWREK 90

Query: 574 NG 579
           NG
Sbjct: 91  NG 92


>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 609

 Score = 39.5 bits (88), Expect = 4e-04
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +1

Query: 379 TTGPSKLLVSNLDFGV--SDSDIQELFSEFGILKSAAV-HYDRSGRSLGTADVVFERRAD 549
           T  P  L V NLD  +  +   ++ELFS+FG +KS  +  Y  +  S G   V F    +
Sbjct: 415 TIDPCNLFVKNLDDNIVGNTQQLEELFSKFGRIKSCTLASYPSTEISKGYGFVSFSHPFE 474

Query: 550 ALKAMKQYNGV 582
           A++A+   NGV
Sbjct: 475 AVQAINTLNGV 485



 Score = 26.2 bits (55), Expect = 3.6
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
 Frame = +1

Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGT------ADVVFERRADALK 558
           + V NL      SD+ ELF  FG      +   +  +S  +      A + FE +  A  
Sbjct: 22  IYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFENKCSADN 81

Query: 559 AMKQYNGVPLDG 594
           A+   NG    G
Sbjct: 82  AIASLNGSSFQG 93


>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 674

 Score = 35.5 bits (78), Expect = 0.006
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +1

Query: 394 KLLVSNLDFGVSDSD-IQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQ 570
           +L++ NL + +     ++  FS+FG ++   +     GR  G A V  + R  A +AM  
Sbjct: 108 RLIIRNLPWSIKKPQHLEPHFSKFGKVREIKIPTKGGGRMCGFAFVWMKDRKAAEEAMNS 167

Query: 571 YNGVPLDG 594
            NG  +DG
Sbjct: 168 LNGTEIDG 175


>SPBC29A3.07c |||U2 snRNP-associated protein Sf3b14 homolog
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 137

 Score = 35.5 bits (78), Expect = 0.006
 Identities = 18/63 (28%), Positives = 36/63 (57%)
 Frame = +1

Query: 391 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQ 570
           S L + NL F ++  ++ +LF  +G ++   +    + ++ GTA VV+E   DA +A ++
Sbjct: 12  SILFIKNLSFKITAEEMYDLFGRYGPVRQ--IRLGNTVQTRGTAFVVYENVQDARRACEK 69

Query: 571 YNG 579
            +G
Sbjct: 70  LSG 72


>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 369

 Score = 34.3 bits (75), Expect = 0.014
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +1

Query: 388 PSKLL-VSNLDFGVSDSDIQELFSEFG-ILKSAAVHYDRSGRSLGTADVVFERRADALKA 561
           PS +L V NLDF  +D+D++E F + G I +   + ++ +G+  G   V F      +KA
Sbjct: 226 PSSILFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKA 285

Query: 562 MK 567
           M+
Sbjct: 286 ME 287


>SPCC126.11c |||RNA-binding protein, rrm type|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 183

 Score = 34.3 bits (75), Expect = 0.014
 Identities = 21/70 (30%), Positives = 35/70 (50%)
 Frame = +1

Query: 385 GPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAM 564
           GP+ +++ NL  G S  D+      FG + +  V+ D  G+    A V F   A A + +
Sbjct: 98  GPTNVVIENLAPGTSSDDVAATLLNFGEILNCQVN-DSQGKV--RASVRFSTLASAQQVV 154

Query: 565 KQYNGVPLDG 594
           ++ +GV  DG
Sbjct: 155 QKLDGVTADG 164


>SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 217

 Score = 33.5 bits (73), Expect = 0.024
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +1

Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRSLGTADVVFERRADALKAMKQY 573
           + + NLDF +++ DI  +FSEFG      +  D+ +G+S G A + +E +   + A+   
Sbjct: 33  IYIGNLDFDLNEDDILCVFSEFGEPVDINLVRDKETGKSKGFAFLKYEDQRSTVLAVDNM 92

Query: 574 NGVPL 588
             V L
Sbjct: 93  TNVKL 97


>SPAC57A7.04c |pabp||mRNA export shuttling protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 653

 Score = 33.5 bits (73), Expect = 0.024
 Identities = 16/68 (23%), Positives = 35/68 (51%)
 Frame = +1

Query: 373 AITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADA 552
           A+    + + + NLD  +++ +  +LF +FG + S ++  D++ +  G   V +     A
Sbjct: 255 ALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECA 314

Query: 553 LKAMKQYN 576
            KA+ + N
Sbjct: 315 QKAVDELN 322


>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 833

 Score = 33.1 bits (72), Expect = 0.032
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
 Frame = +1

Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYD----RSGR--SLGTADVVFERRADALK 558
           + V NL+F     + Q++F       SA +       R G+  S+G   V F+ +A A+ 
Sbjct: 621 IYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKASAVA 680

Query: 559 AMKQYNGVPLDG 594
           AM   NG  LDG
Sbjct: 681 AMHAMNGFVLDG 692



 Score = 27.1 bits (57), Expect = 2.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 397 LLVSNLDFGVSDSDIQELFSEFGIL 471
           LLV N  +G S  ++  LFS FG L
Sbjct: 508 LLVKNFPYGTSAEELTSLFSPFGEL 532


>SPBC18H10.03 |tif35||translation initiation factor
           eIF3g|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 282

 Score = 31.9 bits (69), Expect = 0.073
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRSLGTADVVFERRADALKAMKQY 573
           L V+NL     + ++++LF  FG ++   +  D+ +GR+ G A V +  R  A+KA  + 
Sbjct: 204 LRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRL 263

Query: 574 NG 579
           +G
Sbjct: 264 DG 265


>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
           transcription Rct1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 432

 Score = 31.5 bits (68), Expect = 0.097
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRSLGTADVVFERRADALKAMKQY 573
           L V  L+    D D++ +FS FG + S  V  D+ +G SL  A + F+ +    KA  + 
Sbjct: 246 LFVCKLNPVTQDEDLELIFSRFGKIISCQVIRDKETGDSLQYAFIEFDNKESVEKAYFKM 305

Query: 574 NGVPLD 591
             V +D
Sbjct: 306 QNVLID 311


>SPBC4B4.07c |usp102|mud1|U1 snRNP-associated protein
           Usp102|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 249

 Score = 29.9 bits (64), Expect = 0.29
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +1

Query: 439 IQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYNGVPLDG 594
           ++ LF  +G  K   V   ++ R  G A VVF+   +A +A+K   G PL G
Sbjct: 46  LEHLFGSYG--KVIDVQARKTLRMRGQAFVVFDNLENASRALKDLQGYPLYG 95


>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 121

 Score = 29.1 bits (62), Expect = 0.52
 Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = +1

Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYD-RSGRSLGTADVVFERRADALKAMKQY 573
           ++V+ +    ++  +++LF++FG +K+  ++ D R+G   G A + +     A KA+ + 
Sbjct: 12  IIVTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRTGYVKGYALIEYATLEQAQKAVDEK 71

Query: 574 NGVPLD 591
           N   LD
Sbjct: 72  NLSLLD 77


>SPAC13G6.06c |||glycine cleavage complex subunit
           P|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1017

 Score = 28.7 bits (61), Expect = 0.68
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +1

Query: 409 NLDFGVSDSDIQELFSEFGILKSAAVHY 492
           +LD  V D DIQ LFS F I KS   +Y
Sbjct: 473 SLDETVCDKDIQALFSIFNINKSVDQYY 500


>SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding
           protein 1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 567

 Score = 28.3 bits (60), Expect = 0.90
 Identities = 19/70 (27%), Positives = 31/70 (44%)
 Frame = +1

Query: 382 TGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKA 561
           T  + L +SNL    ++SDI  LF    I+ +  +  D   +S G      + R  A   
Sbjct: 381 TESTNLYISNLPLHWNESDISTLFKPSKIISNRVLR-DSKEQSRGVGFARMQDRKTAEDI 439

Query: 562 MKQYNGVPLD 591
           + ++N   LD
Sbjct: 440 INKFNNFVLD 449


>SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 661

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 397 LLVSNLDFGVSDSDIQELFSEFGILK 474
           L VSNL  G S S I  LFS +G +K
Sbjct: 2   LYVSNLPVGTSSSAIHALFSAYGNVK 27


>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
           Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 832

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = -3

Query: 537 FKH---NICCT*RSSRSIIMNSCTLKNSKFREQFLNV 436
           +KH   NIC + R +  +I  SCT K  +F+E+ L++
Sbjct: 291 YKHEYANICESLRRALVLIQGSCTEKILRFKEKILDL 327


>SPAC3F10.06c |||initiator methionine tRNA 2'-O-ribosyl phosphate
           transferase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 453

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 259 CLAILHLSGYYEIHHHVLVFCLYQIFCQHH 170
           CLA++ L  YY++H H+L   +     Q H
Sbjct: 381 CLALMILCLYYDLHMHLLAHPISLSASQSH 410


>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 944

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 384 CCDSTTSWNLPFTKIIEHVMFPCAVN 307
           CC+S  ++N+P +  I++ M  C  N
Sbjct: 833 CCESVNNFNVPCSATIQNDMVVCRSN 858


>SPBC15D4.11c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 263

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 317 HGNMTCSMILVKGRFQEVVLSQQVPQS 397
           HG + C++IL KG      +S Q PQ+
Sbjct: 149 HGTILCALILCKGMLHFDSISFQSPQN 175


>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1008

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 400 LVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGR 507
           LV    FGV++ D  E+  E    K   + YD+ GR
Sbjct: 660 LVWRRHFGVNNMDPDEIQEENATGKQVLLGYDKDGR 695


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,342,510
Number of Sequences: 5004
Number of extensions: 46313
Number of successful extensions: 132
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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