Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L08
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 49 3e-06
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 49 3e-06
AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 44 8e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 44 8e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 44 8e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 44 8e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 43 1e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 43 1e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 42 3e-04
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 42 3e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 41 8e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 40 0.001
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 40 0.001
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 40 0.001
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 0.001
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 40 0.001
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 40 0.001
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 38 0.004
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 38 0.004
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 38 0.004
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 38 0.005
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 36 0.022
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 35 0.038
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 35 0.051
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 35 0.051
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 34 0.067
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 34 0.088
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 32 0.36
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 32 0.36
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.36
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 31 0.62
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 31 0.62
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 31 0.62
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 31 0.62
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 0.82
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 31 0.82
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 0.82
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 0.82
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 31 0.82
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.82
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 30 1.1
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 30 1.1
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 29 1.9
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.3
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical
protein M18.7a protein.
Length = 240
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/64 (40%), Positives = 43/64 (67%)
Frame = +1
Query: 403 VSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYNGV 582
+SNL V SD++ELF ++ L S +V+++ G SLGT D+ +R DA + +++++GV
Sbjct: 78 ISNLAPTVISSDLEELFGDYR-LSSVSVNFNEHGDSLGTGDISLTKR-DAERLVQKFSGV 135
Query: 583 PLDG 594
LDG
Sbjct: 136 ALDG 139
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/78 (30%), Positives = 43/78 (55%)
Frame = +1
Query: 361 PRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFER 540
P + + GP +L VSN+ F D D++ +F +FG++ + ++ G S G V ER
Sbjct: 143 PSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMER 201
Query: 541 RADALKAMKQYNGVPLDG 594
DA +A ++ +G ++G
Sbjct: 202 PQDAERARQELHGSMIEG 219
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/78 (30%), Positives = 43/78 (55%)
Frame = +1
Query: 361 PRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFER 540
P + + GP +L VSN+ F D D++ +F +FG++ + ++ G S G V ER
Sbjct: 143 PSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMER 201
Query: 541 RADALKAMKQYNGVPLDG 594
DA +A ++ +G ++G
Sbjct: 202 PQDAERARQELHGSMIEG 219
>AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical
protein C02B10.4 protein.
Length = 211
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = +1
Query: 376 ITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADAL 555
I TGPS L++ NL V+ D++ELF ++ + +HY +G S G AD++ A+
Sbjct: 88 IHTGPSTLIIKNLATTVTQEDLEELFEQYE-PELVQLHYGPTGESNGCADLIVPHAQVAI 146
Query: 556 KAMKQYNGVPLDG 594
K GV LDG
Sbjct: 147 -IQKALEGVLLDG 158
>Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical
protein F23B2.6 protein.
Length = 227
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/67 (35%), Positives = 43/67 (64%)
Frame = +1
Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQY 573
++ +SNL V SD+QELF F + K +V+++ +G + GT D+ ++ DA + ++++
Sbjct: 81 RINISNLAETVISSDLQELFGAFNLHK-VSVNFNENGGAAGTGDITL-KKYDADRLIQKF 138
Query: 574 NGVPLDG 594
GV LDG
Sbjct: 139 AGVALDG 145
>Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical
protein C01F6.5 protein.
Length = 223
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 346 GERKVPRS-GAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTA 522
G R V RS A ++ +SNL V D+++LF+EF I ++ +V+++ G+ +GT
Sbjct: 56 GIRTVDRSIPANENREVRINLSNLAHTVHSGDLRQLFAEFKI-RNVSVNFNEHGKPVGTG 114
Query: 523 DVVFERRADALKAMKQYNGVPLDG 594
DV +R A + ++++ GV LDG
Sbjct: 115 DVTLPKR-HADRLIQKFAGVSLDG 137
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYN 576
L V N++ ++D +++ FS FG + SA V D +GRS G V FE+ +A A+ N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 391 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQ 570
+ + V N + + +FS+FG + SA V D G+ G V F + A +A+++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 571 YNGVPLDG 594
N L+G
Sbjct: 298 LNDSILEG 305
Score = 32.3 bits (70), Expect = 0.27
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 379 TTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGR-SLGTADVVFERRADAL 555
T + L + +L VS++ + E FS G + S V D + R SLG A V F++ ADA
Sbjct: 53 TYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAE 112
Query: 556 KAMKQYN 576
+A+ N
Sbjct: 113 RALDTMN 119
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYN 576
L V N++ ++D +++ FS FG + SA V D +GRS G V FE+ +A A+ N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 391 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQ 570
+ + V N + + +FS+FG + SA V D G+ G V F + A +A+++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 571 YNGVPLDG 594
N L+G
Sbjct: 298 LNDSILEG 305
Score = 32.3 bits (70), Expect = 0.27
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 379 TTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGR-SLGTADVVFERRADAL 555
T + L + +L VS++ + E FS G + S V D + R SLG A V F++ ADA
Sbjct: 53 TYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAE 112
Query: 556 KAMKQYN 576
+A+ N
Sbjct: 113 RALDTMN 119
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 44.0 bits (99), Expect = 8e-05
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +1
Query: 376 ITTGPSK--LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRSLGTADVVFERRA 546
+ G SK L+++ L G++ +++ LF+ G ++S + D+ +G+SLG V + R
Sbjct: 35 VDIGESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREE 94
Query: 547 DALKAMKQYNGVPL 588
DAL+A+ +NG+ L
Sbjct: 95 DALRAVSSFNGLRL 108
Score = 35.5 bits (78), Expect = 0.029
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYN 576
L V NL D+ + +LFS+FG + + + D + + G A V +A AM N
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLN 435
Query: 577 GVPLDG 594
G L G
Sbjct: 436 GTNLAG 441
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYN 576
L V NLD V D +++ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Score = 35.9 bits (79), Expect = 0.022
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = +1
Query: 361 PRSGAITTGPS----KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGR-SLGTAD 525
P+ G TG S L V +L V++S + E FS G + S V D + R SLG A
Sbjct: 18 PQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAY 77
Query: 526 VVFERRADALKAMKQYNGVPLDG 594
V F++ ADA +AM N L G
Sbjct: 78 VNFQQPADAERAMDTMNFEALHG 100
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYN 576
L V NLD V D +++ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 318
Score = 35.9 bits (79), Expect = 0.022
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = +1
Query: 361 PRSGAITTGPS----KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGR-SLGTAD 525
P+ G TG S L V +L V++S + E FS G + S V D + R SLG A
Sbjct: 18 PQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAY 77
Query: 526 VVFERRADALKAMKQYNGVPLDG 594
V F++ ADA +AM N L G
Sbjct: 78 VNFQQPADAERAMDTMNFEALHG 100
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYN 576
L V NLD V D +++ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 315
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYN 576
L V NLD V D +++ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Score = 35.9 bits (79), Expect = 0.022
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = +1
Query: 361 PRSGAITTGPS----KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGR-SLGTAD 525
P+ G TG S L V +L V++S + E FS G + S V D + R SLG A
Sbjct: 18 PQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAY 77
Query: 526 VVFERRADALKAMKQYNGVPLDG 594
V F++ ADA +AM N L G
Sbjct: 78 VNFQQPADAERAMDTMNFEALHG 100
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +1
Query: 385 GPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAM 564
GP+ +LV NL + + I+++F FG ++ + D + + G A + F DA K+
Sbjct: 125 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSC 184
Query: 565 KQYNGVPLDG 594
+Q N L G
Sbjct: 185 EQLNNFELAG 194
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +1
Query: 385 GPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAM 564
GP+ +LV NL + + I+++F FG ++ + D + + G A + F DA K+
Sbjct: 270 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSC 329
Query: 565 KQYNGVPLDG 594
+Q N L G
Sbjct: 330 EQLNNFELAG 339
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +1
Query: 367 SGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRA 546
S + T GP +L VSN+ F + D+ +F + G + + ++ G S G V +
Sbjct: 92 SSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPD 150
Query: 547 DALKAMKQYNGVPLDG 594
DA +A ++NG ++G
Sbjct: 151 DADRARAEFNGTTIEG 166
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +1
Query: 367 SGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRA 546
S + T GP +L VSN+ F + D+ +F + G + + ++ G S G V +
Sbjct: 92 SSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPD 150
Query: 547 DALKAMKQYNGVPLDG 594
DA +A ++NG ++G
Sbjct: 151 DADRARAEFNGTTIEG 166
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 403 VSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRSLGTADVVFERRADALKAMKQYNG 579
V N F ++ D+ FS+ G + + + DR +GR G A V F A A +A+ Q+NG
Sbjct: 8 VGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNG 67
Query: 580 VPLDG 594
V +G
Sbjct: 68 VDFNG 72
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +1
Query: 349 ERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADV 528
E++V + T SK+ V N+ F +D +++ LFS+FG + S + G+ G A V
Sbjct: 669 EKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFV 728
Query: 529 VFERRADALKAM 564
F+ A A K +
Sbjct: 729 DFDTEASAQKCV 740
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 41.1 bits (92), Expect = 6e-04
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 388 PSKLL-VSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRSLGTADVVFERRADALKA 561
PSK L V NL ++ D++++F EFG + + YDR SG S G + F DA A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 562 MKQYNGVPLDG 594
+ LDG
Sbjct: 134 RDKLCNTDLDG 144
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 403 VSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRSLGTADVVFERRADALKAMKQYNG 579
V N+ + ++ +I F+ G + + + YDR +GR G A V F A A +A++Q NG
Sbjct: 10 VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
Query: 580 VPLDG 594
V +G
Sbjct: 70 VAFNG 74
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 40.7 bits (91), Expect = 8e-04
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 361 PRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRSLGTADVVFE 537
P G+ T +K+ V L + SD + E F +FG ++ A V DR + +S G V +
Sbjct: 25 PVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMK 84
Query: 538 RRADALKAMKQYNGVPLDG 594
RA A +A K N + +DG
Sbjct: 85 DRASAERACKDPNPI-IDG 102
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +1
Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQ 570
KL + L ++ +++E+F++FG ++ +V D+ G+S G A V F R+ A+ A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +1
Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQ 570
KL + L ++ +++E+F++FG ++ +V D+ G+S G A V F R+ A+ A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +1
Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQ 570
KL + L ++ +++E+F++FG ++ +V D+ G+S G A V F R+ A+ A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +1
Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQ 570
KL + L ++ +++E+F++FG ++ +V D+ G+S G A V F R+ A+ A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +1
Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQ 570
KL + L ++ +++E+F++FG ++ +V D+ G+S G A V F R+ A+ A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +1
Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQ 570
KL + L ++ +++E+F++FG ++ +V D+ G+S G A V F R+ A+ A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/89 (28%), Positives = 42/89 (47%)
Frame = +1
Query: 328 DMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGR 507
D++ D+ E + + L + N+ V++ + ELF E+ L DR +
Sbjct: 356 DVYVDWAEHQEEPDEDTMSKVKVLYIRNIKEAVTEEKLNELFKEYASL-------DRVKK 408
Query: 508 SLGTADVVFERRADALKAMKQYNGVPLDG 594
A + F R D LKAM+++NG L+G
Sbjct: 409 VKDYAFIHFNERDDCLKAMEEWNGKELEG 437
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/79 (30%), Positives = 41/79 (51%)
Frame = +1
Query: 358 VPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFE 537
+PR G+ K+ V NL V + +++++F ++G +K + +SGR A V FE
Sbjct: 1 MPRGGS---EDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPAFAFVEFE 54
Query: 538 RRADALKAMKQYNGVPLDG 594
DA A++ +G DG
Sbjct: 55 DHRDAEDAVRARDGYEFDG 73
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/79 (30%), Positives = 41/79 (51%)
Frame = +1
Query: 358 VPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFE 537
+PR G+ K+ V NL V + +++++F ++G +K + +SGR A V FE
Sbjct: 1 MPRGGS---EDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPAFAFVEFE 54
Query: 538 RRADALKAMKQYNGVPLDG 594
DA A++ +G DG
Sbjct: 55 DHRDAEDAVRARDGYEFDG 73
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 382 TGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRSLGTADVVFERRADALK 558
+G + V N F ++ ++ FS G + + + DR +GR G A + F A +
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 559 AMKQYNGVPLDG 594
A++Q NG +G
Sbjct: 62 AVEQMNGAEFNG 73
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 35.9 bits (79), Expect = 0.022
Identities = 27/91 (29%), Positives = 42/91 (46%)
Frame = +1
Query: 304 DVNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAA 483
DVN+ + M + ER+ G + P L V NLD V++ I LF++ G +
Sbjct: 17 DVNTGYNARMHSKLAEREGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTK 76
Query: 484 VHYDRSGRSLGTADVVFERRADALKAMKQYN 576
V +D G + A V F A +A++ N
Sbjct: 77 VIFD--GSNDPYAFVEFSDHGQASQALQTMN 105
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 35.1 bits (77), Expect = 0.038
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +1
Query: 304 DVNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAA 483
DVN+ + M + ER+ G + P L V NLD V++ I LF++ G +
Sbjct: 17 DVNTGYNARMHSKLAEREGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTK 76
Query: 484 VHYDRSG 504
V +D G
Sbjct: 77 VIFDELG 83
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 34.7 bits (76), Expect = 0.051
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFG-ILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQY 573
+ V N+ + VS+ I+ +FS+ G +L VH +G+ G + F A A++
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 574 NGVPLDG 594
NG L G
Sbjct: 80 NGYELSG 86
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDR-SGRSLGTADVVFERRADALKAMKQY 573
+ + L + +S+ D+ +FS++G + + + D+ +G+S G A + ++ + + A+ +
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 574 NGVPL 588
NG+ L
Sbjct: 100 NGISL 104
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 34.3 bits (75), Expect = 0.067
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYN 576
L + NL + ++ ++ E+F +FG ++ + + + GTA VV+E DA A + +
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQ--IRVGNTAETRGTAFVVYEDIFDAKTACEHLS 78
Query: 577 G 579
G
Sbjct: 79 G 79
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 33.9 bits (74), Expect = 0.088
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQY 573
++ ++NL F V + E+F G + D+ G+S G + + +A++A+
Sbjct: 189 RIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSML 248
Query: 574 NG 579
NG
Sbjct: 249 NG 250
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +1
Query: 304 DVNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEFGILKSAA 483
DVN+ + M + ER+ G + P L V NLD V++ I LF++ G +
Sbjct: 17 DVNTGYNARMHSKLAEREGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTK 76
Query: 484 VHYD 495
V +D
Sbjct: 77 VIFD 80
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.36
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYD-RSGRSLGTADVVFERRADALKAMKQY 573
L V L+ +D D++ +FS FG + + + D RSG SL A + F+ +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 574 NGVPLD 591
+ V +D
Sbjct: 303 DNVLID 308
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.36
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYD-RSGRSLGTADVVFERRADALKAMKQY 573
L V L+ +D D++ +FS FG + + + D RSG SL A + F+ +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 574 NGVPLD 591
+ V +D
Sbjct: 303 DNVLID 308
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 31.9 bits (69), Expect = 0.36
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 397 LLVSNLDFGVSDSDIQELFSEFGILKSAAVHYD-RSGRSLGTADVVFERRADALKAMKQY 573
L V L+ +D D++ +FS FG + + + D RSG SL A + F+ +A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 574 NGVPLD 591
+ V +D
Sbjct: 234 DNVLID 239
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 31.9 bits (69), Expect = 0.36
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 403 VSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAM 564
V L VS+ + FS FG ++ A D GR G V FER+ + +AM
Sbjct: 193 VKELSPTVSNEMLYHAFSHFGDVERAVHIVDEKGRPTGEGIVEFERKPNCNEAM 246
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.36
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 403 VSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAM 564
V L VS+ + FS FG ++ A D GR G V FER+ + +AM
Sbjct: 193 VKELSPTVSNEMLYHAFSHFGDVERAVHIVDEKGRPTGEGIVEFERKPNCNEAM 246
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 424 VSDSDIQELFSEFGILKSAAVHYDRS-GRSLGTADVVFERRADALKAMKQ 570
V+ +I ++FSEFG++ + D+ G G A V FER + +A+++
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 379
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 424 VSDSDIQELFSEFGILKSAAVHYDRS-GRSLGTADVVFERRADALKAMKQ 570
V+ +I ++FSEFG++ + D+ G G A V FER + +A+++
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 379
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 424 VSDSDIQELFSEFGILKSAAVHYDRS-GRSLGTADVVFERRADALKAMKQ 570
V+ +I ++FSEFG++ + D+ G G A V FER + +A+++
Sbjct: 116 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 165
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 424 VSDSDIQELFSEFGILKSAAVHYDRS-GRSLGTADVVFERRADALKAMKQ 570
V+ +I ++FSEFG++ + D+ G G A V FER + +A+++
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 379
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 307 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 480
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 307 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 480
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 307 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 480
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 307 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 480
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 307 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 480
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 307 VNSTWKHDMFNDFGERKVPRSGAITTGPSKLLVSNLDFGVSDSDIQELFSEF-GILKSA 480
V W D+ + + R T S++ S++DF ++ SD Q FSE+ G KS+
Sbjct: 438 VRKAWLRDIAEEQEKYAAERDAISMTATSEMTASSVDFDMNASDQQSEFSEWSGSRKSS 496
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 391 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQ 570
+ + V N+ +D+D+++LFS +G + A V ++ R A V +E++ A KA+ +
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDI--AEVRIFKTQR---YAFVRYEKKECATKAIME 291
Query: 571 YNGVPLDG 594
NG + G
Sbjct: 292 MNGKEMAG 299
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +1
Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRSGRSLG 516
KL + L ++ +++E+F++FG ++ +V D+ G+S G
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRG 183
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 212 VVVDFVIAAQVEYCEAEIVAA*PRLRITQGVMLTAHG 322
+V D + ++YC+ ++ A PRL I G+++ ++G
Sbjct: 207 LVKDLITQDLIDYCDPSVMIAIPRLGIVWGLLVYSNG 243
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Frame = +1
Query: 391 SKLLVSNLDFGVSDSDIQELFSE-FG-ILKSAAVHYDRSGR------SLGTADVVFERRA 546
S L V NL F +D ++ LF + +G ++KSA + + S+G V F
Sbjct: 641 STLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTAF 700
Query: 547 DALKAMKQYNGVPLDG 594
DA A+K G LDG
Sbjct: 701 DAKTALKDMQGELLDG 716
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Frame = +1
Query: 394 KLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYD-----------RSGRSLGTADVVFER 540
K++VSN+ V+ S +Q FS++G + S + + + R+ GTA + F++
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTLPKHSRNCGTATITFKK 172
Query: 541 RADALKA 561
A +A
Sbjct: 173 SEHADRA 179
>Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical
protein T20B3.3 protein.
Length = 332
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 295 CNS*SWLRRHDFCLAILHLSGYYEIHHHVL-VFCLY 191
CN +L DF +LH+ + I HV VFC++
Sbjct: 6 CNQTGYLHTADFQRLVLHVISFISIPIHVFGVFCVF 41
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 280 KTTNYTRGDVNSTWKHDMFNDFGERKVPRSGAITTGPSKLL---VSNLDFGVSDSDIQEL 450
+T + D N K D R + +S A + L V N+ +++ ++ +
Sbjct: 103 ETEGEEKKDENKEGKRDRTKQRENRTLQKSNARASAAENALTVFVGNMPLTMNEKSVRRI 162
Query: 451 FSEFGILKS 477
FS+FG + S
Sbjct: 163 FSDFGTISS 171
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 391 SKLLVSNLDFGVSDSDIQELFSEFGILKSAAVHYDRS----GRSLGTADVVFERRADALK 558
+ + VSN+ V++ D+ F FG L + + Y RS R A V F RAD +
Sbjct: 200 TNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHICAFVAFMSRADVDR 259
Query: 559 AMKQ 570
M +
Sbjct: 260 FMAE 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,920,372
Number of Sequences: 27780
Number of extensions: 258942
Number of successful extensions: 674
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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