Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_L08
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.0  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 304 DVNSTWKHDMFNDFGERKVPRS 369
           D++S W  D  +   E+K+P+S
Sbjct: 195 DLSSEWDSDYTDKSNEKKIPKS 216


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 520 ADVVFERRADALKAMKQYNGVPL 588
           AD+        L+A K+YN VP+
Sbjct: 435 ADLTVVSGGSVLRATKEYNTVPI 457


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 520 ADVVFERRADALKAMKQYNGVPL 588
           AD+        L+A K+YN VP+
Sbjct: 435 ADLTVVSGGSVLRATKEYNTVPI 457


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 520 ADVVFERRADALKAMKQYNGVPL 588
           AD+        L+A K+YN VP+
Sbjct: 435 ADLTVVSGGSVLRATKEYNTVPI 457


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,242
Number of Sequences: 438
Number of extensions: 3087
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)