Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L06
(582 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 272 4e-72
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 206 3e-52
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 161 1e-38
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 147 2e-34
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 142 7e-33
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 140 2e-32
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 139 4e-32
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 119 6e-26
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 117 2e-25
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 107 1e-22
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 102 7e-21
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 100 2e-20
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 100 5e-20
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 98 2e-19
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 93 3e-18
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 92 8e-18
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 89 9e-17
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 72 9e-12
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 69 6e-11
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 68 2e-10
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 66 8e-10
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 63 4e-09
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 52 1e-05
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 50 3e-05
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 48 2e-04
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 44 0.002
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 43 0.005
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 42 0.008
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 35 1.6
UniRef50_UPI0000D55A40 Cluster: PREDICTED: similar to CG33232-PC... 33 4.9
UniRef50_UPI00015B5F61 Cluster: PREDICTED: similar to ENSANGP000... 33 6.5
UniRef50_Q1JVH7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_Q0CRD5 Cluster: Putative uncharacterized protein; n=2; ... 32 8.6
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 272 bits (667), Expect = 4e-72
Identities = 131/193 (67%), Positives = 145/193 (75%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRX 182
NGGTRTV LK RKSFYPTQ+KIR S G+ FSKHVRR RPNL GTVCILLAGRHAGKR
Sbjct: 81 NGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV 140
Query: 183 XXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXX 362
TGPFAFN+CPLRRIPQRYVIGTST++ LG+FKLP H +D YF
Sbjct: 141 VLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKK 200
Query: 363 XXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRASF 542
+ +DIFATKKEKYVPSEQR DQK VDEAVIKAI RP++K LRGYL+A+F
Sbjct: 201 CVKRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAF 260
Query: 543 GLRSSQFPHRLRF 581
GLRSSQ+PHRLRF
Sbjct: 261 GLRSSQYPHRLRF 273
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 206 bits (503), Expect = 3e-52
Identities = 104/193 (53%), Positives = 124/193 (64%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRX 182
NGG RTV LK K+ YPT+ ++ R +FS+H R TR NLTPGTV ILLAGRH GKR
Sbjct: 73 NGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRV 132
Query: 183 XXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXX 362
TGPFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF
Sbjct: 133 VLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKA 192
Query: 363 XXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRASF 542
DIFA KKE++VP+EQR DQK VD A++K I+ PE K YL+ F
Sbjct: 193 KKDKKTG---EADIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMF 249
Query: 543 GLRSSQFPHRLRF 581
L SSQ+PHR+RF
Sbjct: 250 ALHSSQYPHRMRF 262
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 161 bits (391), Expect = 1e-38
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 147 bits (356), Expect = 2e-34
Identities = 81/195 (41%), Positives = 107/195 (54%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR--SHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGG R + LK + YPT+D + + SH K S+ R +TPGTV ILLAG H GK
Sbjct: 77 NGGKRVLPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGK 136
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP+ N CPLRRI Q YVI TSTK+DL KLP LDD YF
Sbjct: 137 RVVFLKQLKTGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPEGLDDRYF--- 193
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
+IF K +++V SE+ Q VD+ V++A++ PE+K L YL A
Sbjct: 194 KRNKGPKRGRKDEGEIFEAKPQEHVVSEEHKKTQAEVDKQVLEAVKAHPEKKMLLHYLAA 253
Query: 537 SFGLRSSQFPHRLRF 581
+F LR+ +PH+++F
Sbjct: 254 TFSLRNRMYPHKMKF 268
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 142 bits (343), Expect = 7e-33
Identities = 80/196 (40%), Positives = 106/196 (54%), Gaps = 6/196 (3%)
Frame = +3
Query: 12 TRTVLLKSRKSF---YPTQD---KIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAG 173
T+ L+K + F Y TQ K+R R K FS HVR+ R ++ PGTV ILLAG H G
Sbjct: 48 TKEALVKPKTRFPRSYVTQQGKRKLRLR-RAKCFSNHVRKIRSSIQPGTVLILLAGPHKG 106
Query: 174 KRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXX 353
KR TGPF +N PLRR+ Q YVI TST++D+ F +P H+DD YF
Sbjct: 107 KRVIFLKALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYF-- 164
Query: 354 XXXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLR 533
A +F+T+ +KY S+ R DQKLVD + AI+ P+ K L YLR
Sbjct: 165 --RRVDLKESKTDAGKLFSTETKKYTVSDIRKEDQKLVDNQIRAAIKSHPDSKILHAYLR 222
Query: 534 ASFGLRSSQFPHRLRF 581
+ F L +PH++ F
Sbjct: 223 SLFSLGKRDYPHKMIF 238
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 140 bits (340), Expect = 2e-32
Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 1/194 (0%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFS-KHVRRTRPNLTPGTVCILLAGRHAGKR 179
NGGTR V + FYP + + R H + + K+ + R +L PGT+ ILLAG + GKR
Sbjct: 54 NGGTRLVSTRKPPQFYPINSRQK-RFHRRLVNNKNPPKIRKSLQPGTILILLAGVNRGKR 112
Query: 180 XXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXX 359
+GP N PLRR+ Q+ VI TST++D+ + K+P H++D YF
Sbjct: 113 VVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHINDTYF---- 168
Query: 360 XXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRAS 539
+ DIFA+K E+Y P+EQR DQ VD ++KAI+ +P+ L YLR
Sbjct: 169 -RRHKVKKEAKEGDIFASKPERYTPTEQRKKDQAEVDVQLLKAIKAQPDAAMLVKYLRTI 227
Query: 540 FGLRSSQFPHRLRF 581
FGL+++ PHRL+F
Sbjct: 228 FGLKNNMIPHRLKF 241
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 139 bits (337), Expect = 4e-32
Identities = 81/195 (41%), Positives = 105/195 (53%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRX 182
NGG R V ++ +YPT+D R ++ K + + R ++TPGTV ILLAG H GKR
Sbjct: 61 NGGKRVVPVQRESRYYPTEDVRRRLANRKK--PGMAKLRSSITPGTVLILLAGAHRGKRV 118
Query: 183 XXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAH--LDDAYFXXX 356
TGPF N PLRRIPQ YVI TST +D+ D KLP H D++YF
Sbjct: 119 VFLKQLNSGLLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEHAFADESYF--- 175
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
++ED+F E+ PSEQR+ADQK VD+ ++ I P K YL +
Sbjct: 176 ---KGEPKKKKRSEDMFEEAAEEKKPSEQRIADQKAVDDQILPKISAVPNMKK---YLSS 229
Query: 537 SFGLRSSQFPHRLRF 581
F LR QFPH + F
Sbjct: 230 LFSLRKGQFPHDMVF 244
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 119 bits (286), Expect = 6e-26
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Frame = +3
Query: 117 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTST 293
R LTPGTV I+LAGRH GKR TGP N PLRRI Q +VI TS
Sbjct: 68 RKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATSL 127
Query: 294 KVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDE 473
KV++ K+P H++D YF ++IFA+ K +Y SEQR D K VD
Sbjct: 128 KVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEYTVSEQRKKDIKTVDA 181
Query: 474 AVIKAIRLRPEQKTLRGYLRASFGLRSSQFPHRLRF 581
++ AI+ PE K L GYL F L +Q+PH+++F
Sbjct: 182 PILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHKMQF 217
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 117 bits (281), Expect = 2e-25
Identities = 71/191 (37%), Positives = 100/191 (52%)
Frame = +3
Query: 9 GTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXX 188
G R + K+ K +IR + K K R ++TPGTV I+LAGR AGKR
Sbjct: 54 GKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVA--LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 189 XXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXX 368
TGPF N PLRRI QRYVI TSTK+D+ K+ A ++DAYF
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKST 171
Query: 369 XXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRASFGL 548
+++ K EK ++ R+ADQK VD A++ ++ ++K L YL+ F L
Sbjct: 172 TKSEGAFFSDE---KKAEKKKIADSRVADQKSVDSAILAVLK---KEKFLTVYLKTKFYL 225
Query: 549 RSSQFPHRLRF 581
+ +FPH+L+F
Sbjct: 226 KKGEFPHQLKF 236
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 107 bits (258), Expect = 1e-22
Identities = 72/179 (40%), Positives = 89/179 (49%)
Frame = +3
Query: 45 FYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFT 224
FYP +D ++ + +K + R ++TPGTV I+LAGR GKR T
Sbjct: 64 FYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVT 121
Query: 225 GPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQAEDI 404
GPF N PLRR+ Q YVIGTSTKVD+ L DD YF + E
Sbjct: 122 GPFKINGVPLRRVNQAYVIGTSTKVDISGVTLD-KFDDKYF---GKVAEKKKKKTEGEFF 177
Query: 405 FATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRASFGLRSSQFPHRLRF 581
A K+EK + + DQK VD A+IKAI PE KT YL A F L+ PH L F
Sbjct: 178 EAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPELKT---YLGARFSLKQGMKPHELVF 233
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 102 bits (244), Expect = 7e-21
Identities = 71/185 (38%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Frame = +3
Query: 33 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 212
S FYP D ++ R + + R ++TPGTV ILLAGR GKR
Sbjct: 49 SAPKFYPADD-VKPRQPSTR-KPNPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGL 106
Query: 213 XXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQ 392
TGPF N P+RR+ Q YVI TSTKVD+ + DD YF
Sbjct: 107 LLVTGPFKINGVPIRRVNQPYVIATSTKVDISGVNV-EKFDDKYFSRDKKQKAKKTEG-- 163
Query: 393 AEDIFATKKE--KYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRASFGLRSSQFP 566
++F T+KE K +P E + DQK+VD +IKAI P+ KT YL A F LR P
Sbjct: 164 --ELFETEKEATKNLP-EFKKEDQKVVDAELIKAIEAVPDLKT---YLGARFSLRDGDKP 217
Query: 567 HRLRF 581
H + F
Sbjct: 218 HEMVF 222
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 100 bits (240), Expect = 2e-20
Identities = 49/121 (40%), Positives = 72/121 (59%)
Frame = +3
Query: 219 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQAE 398
F GPF+ N P+RRI Q++V+ TSTK+D+ K+PA + D YF + +
Sbjct: 13 FLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTKYFGK------EKK 66
Query: 399 DIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRASFGLRSSQFPHRLR 578
DIF K++Y ++ R ADQK +D AV+ +I+ + K L GYLR +FGL Q+PH +
Sbjct: 67 DIFEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLRTNFGLSKRQYPHNMV 126
Query: 579 F 581
F
Sbjct: 127 F 127
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 99.5 bits (237), Expect = 5e-20
Identities = 53/132 (40%), Positives = 72/132 (54%)
Frame = +3
Query: 93 FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQR 272
F+ H RR R ++TPG V ILLAGRH KR TGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 273 YVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQAEDIFATKKEKYVPSEQRMA 452
YVI T T++ + + K+P+ L+D +F + IFA +++KY S+ R
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFF-----RRQDLKTKKSVDKIFAEEEKKYTVSDDRKK 200
Query: 453 DQKLVDEAVIKA 488
QK VD A+I A
Sbjct: 201 LQKQVDTALIAA 212
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 97.9 bits (233), Expect = 2e-19
Identities = 63/192 (32%), Positives = 87/192 (45%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRX 182
NGG R V K +YP DK K+ K + RP++ GT+ ILLAG G R
Sbjct: 32 NGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIVILLAGVFRGSRV 90
Query: 183 XXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXX 362
TGP+A N PL R+ QRYVI TST +D+ + +D+AYF
Sbjct: 91 VVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-KKIDNAYF---RK 146
Query: 363 XXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRASF 542
D ++K E R+ADQK +D ++ I P L YL+ F
Sbjct: 147 PQKKKKTDVMEVDTAKKDEQKTKAIEARIADQKAIDAVLLPVIEKEP---LLSSYLKVKF 203
Query: 543 GLRSSQFPHRLR 578
L+ Q+PH ++
Sbjct: 204 SLKKGQYPHAMK 215
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 93.5 bits (222), Expect = 3e-18
Identities = 67/196 (34%), Positives = 93/196 (47%), Gaps = 5/196 (2%)
Frame = +3
Query: 9 GTRTVLLKSRKS--FYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRX 182
G R + S+K+ +YP D+ + + K+ H + RP+L PGT+ ILLAGR GKR
Sbjct: 19 GERVIPHPSQKAQKWYPADDEPQPKKARKT--AHPTKLRPSLQPGTILILLAGRFRGKRV 76
Query: 183 XXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLG--DFK-LPAHLDDAYFXX 353
TGPF N PLRR+ RYVI TS+ VDL D K L YF
Sbjct: 77 ILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDLNGVDQKTLEKVSQPEYFTR 136
Query: 354 XXXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLR 533
+ K EK + R ADQK +D+A++ I+ P L YL
Sbjct: 137 EKAEQKKGEEAFFKQ---GEKPEKKKVASARAADQKAIDQALLATIKKEP---FLGSYLA 190
Query: 534 ASFGLRSSQFPHRLRF 581
++F LR+ PH +++
Sbjct: 191 STFSLRTGDKPHEMKW 206
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 92.3 bits (219), Expect = 8e-18
Identities = 62/179 (34%), Positives = 91/179 (50%)
Frame = +3
Query: 45 FYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFT 224
+YP++D + K+ ++ R +L PGTV ILLAGR GKR +
Sbjct: 9 WYPSEDVAALKKTRKA--ARPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLIS 66
Query: 225 GPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQAEDI 404
GPF N PLRR+ RYVI TSTKV + + + YF + ++
Sbjct: 67 GPFKVNGVPLRRVNARYVIATSTKVSVEGVNV-EKFNVEYF----AKEKLTKKEKKEANL 121
Query: 405 FATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRASFGLRSSQFPHRLRF 581
F ++ K + +E R+ DQK+VD+A+I I+ P L+ YL ASF L++ PH L+F
Sbjct: 122 FPEQQNKEIKAE-RVEDQKVVDKALIAEIKKTP---LLKQYLSASFSLKNGDKPHMLKF 176
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 88.6 bits (210), Expect = 9e-17
Identities = 54/157 (34%), Positives = 75/157 (47%)
Frame = +3
Query: 111 RTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 290
+ R +L PG VCILLAG + GKR TGP+A N P+RR+ Y+I TS
Sbjct: 34 KLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGVPVRRVNPAYIIATS 93
Query: 291 TKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVD 470
TKVD+ + + D YF D K V SE+R Q+ +D
Sbjct: 94 TKVDVSKADV-SKFTDEYFKVDRSKLKKSKDAFM--DQGEETKVNRVVSEERKKTQQALD 150
Query: 471 EAVIKAIRLRPEQKTLRGYLRASFGLRSSQFPHRLRF 581
++I +I+ P + YL+ F L S FPH+L+F
Sbjct: 151 ASIIPSIQSNP---LMMSYLKTRFTLTSGMFPHKLKF 184
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 72.1 bits (169), Expect = 9e-12
Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Frame = +3
Query: 117 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 296
R L PGTV ILLAGR GKR TGPF N PLRR+ RYVI TS K
Sbjct: 36 RSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRRVNARYVIATSQK 95
Query: 297 VDL--------GDFKLPAHL----------DDAYF---XXXXXXXXXXXXXXQAEDIFAT 413
VDL + P + ++A+F A +
Sbjct: 96 VDLAGIDEAKINEIAQPKYFTAEKSKEKAGEEAFFKQGEKPQVRLGNSELEHGAHNADIV 155
Query: 414 KKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRASFGLRSSQFPHRLRF 581
++K V S R+ADQK +D+A+I I+ + + L YL +SF LR PH +++
Sbjct: 156 MQKKEVSS-SRVADQKAIDKALIANIK---KVEFLASYLASSFTLRKGDKPHEMKW 207
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 69.3 bits (162), Expect = 6e-11
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 19/185 (10%)
Frame = +3
Query: 84 GKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRI 263
G+ ++ V + R +L PG V ILL G + GKR TGPF+FN PLRR+
Sbjct: 31 GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSGLLLVTGPFSFNGVPLRRV 89
Query: 264 PQRYVIGTSTKV----DLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQAEDIFATKKEKYV 431
RYVI TST V + L + ++ A AE F +K+K
Sbjct: 90 NSRYVIATSTNVYEFPEYDGSSLKSSVERAVSDLTDESFGKTKETKLAE--FKDRKKKNK 147
Query: 432 PSEQRMADQKLVDE------AVIKAIR------LRPEQKT---LRGYLRASFGLRSSQFP 566
+ D+ V E A +KA++ L P K L YL++ F LR++ +P
Sbjct: 148 NKDSMFVDEPSVSEKSPELMAKLKALQSKVDDVLVPSLKKSQHLTKYLKSRFTLRNNMYP 207
Query: 567 HRLRF 581
H L+F
Sbjct: 208 HLLKF 212
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 67.7 bits (158), Expect = 2e-10
Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
Frame = +3
Query: 114 TRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 293
T + PG V ILL+GR GKR TGPF N PL+R+ YVI TST
Sbjct: 54 TLRKIVPGQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKINGVPLKRVNSAYVIPTST 113
Query: 294 KVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQAEDIFATKKEKYVPS---EQRMADQKL 464
KVD+ ++D YF A+ T +++ + + QK
Sbjct: 114 KVDVTGVN-ANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQTAEKTRLDGKRNTQKS 172
Query: 465 VDEAVIKAIRLRPEQKTLRGYLRASFGLRSSQFPHRLRF 581
VD A+I AI+ + + L+ YL A F + + PH L F
Sbjct: 173 VDAALITAIK---KTQLLKQYLGARFTIGKTTRPHELVF 208
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 65.7 bits (153), Expect = 8e-10
Identities = 48/163 (29%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Frame = +3
Query: 117 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTST 293
R + PG + I+LAGR G+R +GP +N P+RRI RYVI TST
Sbjct: 30 RKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATST 89
Query: 294 KVDLGD----------FKLPAHLDDAYFXXXXXXXXXXXXXXQAEDIFATKKEKYVPSEQ 443
VD+ F+ P +A + +K + S+
Sbjct: 90 TVDISSVDTAPITAEVFQRPKAEKPTKSEGDFMGDKQKAKAEKAAKKTSKAGKKTLVSDA 149
Query: 444 RMADQKLVDEAVIKAIRLRPEQKTLRGYLRASFGLRSSQFPHR 572
R QK +D A+I AI+ + K GYLR+ F ++ PHR
Sbjct: 150 RAQLQKKIDAALIAAIKKDAQGKEKAGYLRSVFTVKPGDAPHR 192
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 63.3 bits (147), Expect = 4e-09
Identities = 34/75 (45%), Positives = 39/75 (52%)
Frame = +3
Query: 123 NLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVD 302
++TP TV I+L GRH GKR TGP A N PL R+ Q VI T TKVD
Sbjct: 8 SITPQTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVD 67
Query: 303 LGDFKLPAHLDDAYF 347
+ K HL DA F
Sbjct: 68 ICKVKTSKHLTDASF 82
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +3
Query: 417 KEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRASFGLRSSQFPHRLRF 581
KEKY +EQR DQK VD ++ ++ P+ LRGYLR+SF L +PH+L F
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTPQ---LRGYLRSSFCLSGGVYPHKLVF 54
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +3
Query: 108 RRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGT 287
R+ R ++ G V I+L G+H GKR GP+ N PL+R+ RY+I T
Sbjct: 68 RKMRSSIQVGKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVT 127
Query: 288 STKV 299
ST +
Sbjct: 128 STNI 131
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 48.0 bits (109), Expect = 2e-04
Identities = 54/191 (28%), Positives = 81/191 (42%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRX 182
NGGT V L+ K + + + + +F KH + N TP TV I++ G+H +R
Sbjct: 98 NGGTGVVKLQKMKMYLGS---CKAMAKSPAF-KHEKAVC-NSTPETVLIIITGQH--RRV 150
Query: 183 XXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXX 362
TGP A N L R Q+ V+ TST ++ D YF
Sbjct: 151 VFLKQLSRGFLLITGPLALNLVLLYRTHQKSVVITSTTINT--------QTDVYF----K 198
Query: 363 XXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRASF 542
Q IF +K+KY +Q AD K +D ++ P++K +L +SF
Sbjct: 199 MKQLHKPRHQQGKIFDMEKDKY-GIKQCKADHKTLDSQIL------PKRKL---FLNSSF 248
Query: 543 GLRSSQFPHRL 575
L + PH+L
Sbjct: 249 SLANGMCPHKL 259
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +3
Query: 222 TGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYF 347
TG F N PLRR+ Q YVI TSTKVD+ + DD YF
Sbjct: 172 TGSFKINGVPLRRVNQAYVIATSTKVDIPKVNV-EKFDDKYF 212
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 43.2 bits (97), Expect = 0.005
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = +3
Query: 114 TRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 293
TRP+L GTV I++ G H GKR GP P+ I Q Y+I TST
Sbjct: 52 TRPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGP----VVPVNEISQDYLIATST 107
Query: 294 KVDLGDFKLPAHLDDA 341
+++ A ++ A
Sbjct: 108 SIEVAANATEAQVEAA 123
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 42.3 bits (95), Expect = 0.008
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +3
Query: 105 VRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIG 284
VRRT +L G V ++L G A +R GP + N PL RI +RY++
Sbjct: 22 VRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSINGIPLFRIDERYLLA 79
Query: 285 TSTKVDL 305
TST +DL
Sbjct: 80 TSTVLDL 86
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 34.7 bits (76), Expect = 1.6
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 114 TRPNLTPGTVCILLAGRHAGKR 179
++P + PG VCI+L GRHAGK+
Sbjct: 2 SQPIIKPGLVCIVLQGRHAGKK 23
>UniRef50_UPI0000D55A40 Cluster: PREDICTED: similar to CG33232-PC,
isoform C; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG33232-PC, isoform C - Tribolium castaneum
Length = 2178
Score = 33.1 bits (72), Expect = 4.9
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -2
Query: 347 KVGIVKMRR*LEIAQVYLSR-CSNDIALRNPAQGTRVESKRSSEE*QTTRQHSNE 186
K GI+K RR L+ +QV R CS D+A + P + ++++R S + TR S E
Sbjct: 392 KQGILKKRRSLDESQVMRHRSCSPDVANKAPDSRSILKNQRRSSMEELTRTQSPE 446
>UniRef50_UPI00015B5F61 Cluster: PREDICTED: similar to
ENSANGP00000024127; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000024127 - Nasonia
vitripennis
Length = 359
Score = 32.7 bits (71), Expect = 6.5
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 417 KEKYVPSEQRMAD-QKLVDEAVIKAIRLRPEQKTLRGYLRASFGLRSSQFPHRLR 578
+ KY S+Q +AD ++++DE I L E KTLR + ++ G RS F R
Sbjct: 177 QRKYTESKQLLADLEQMMDEQEFSDIELTVEDKTLRAH-KSILGKRSRVFAAMFR 230
>UniRef50_Q1JVH7 Cluster: Putative uncharacterized protein; n=1;
Desulfuromonas acetoxidans DSM 684|Rep: Putative
uncharacterized protein - Desulfuromonas acetoxidans DSM
684
Length = 181
Score = 32.3 bits (70), Expect = 8.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 5 WRHSYSPAEKQEIILPHSGQDQGSFSWQE 91
W + PA +Q ++L +SG+D GS W +
Sbjct: 66 WAIQFDPAGRQYVVLSNSGEDAGSEDWTD 94
>UniRef50_Q0CRD5 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Aspergillus terreus (strain NIH 2624)
Length = 694
Score = 32.3 bits (70), Expect = 8.6
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Frame = +2
Query: 398 GHLC-----YQEGEIRSIRATYG*PEAGRRGRDKGDQ----TPARAEDTPRLPQGLVRAP 550
GHLC + +R + AT G A +R R + D +R +D+ R+P + +P
Sbjct: 458 GHLCSGNTFVHDEYMRMLLATDGELRARKRARQETDSFQSTQSSRGDDSRRVPSVAIPSP 517
Query: 551 IESVPAPSAL 580
+ +P PS+L
Sbjct: 518 SDGIPNPSSL 527
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,350,721
Number of Sequences: 1657284
Number of extensions: 11206036
Number of successful extensions: 33332
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 31990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33294
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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