Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L06
(582 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 161 1e-39
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 161 1e-39
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 161 1e-39
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 161 1e-39
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 161 1e-39
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 161 1e-39
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 161 1e-39
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 161 1e-39
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 161 1e-39
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 161 1e-39
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 152 1e-36
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 151 2e-36
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 98 2e-20
AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein. 31 2.2
AK092587-1|BAC03920.1| 251|Homo sapiens protein ( Homo sapiens ... 30 5.2
U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein L... 30 6.8
BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcript... 30 6.8
BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcript... 30 6.8
BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcript... 30 6.8
BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein. 30 6.8
AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcript... 30 6.8
AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcript... 30 6.8
AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcript... 30 6.8
AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcript... 30 6.8
AF315602-1|AAN15780.1| 672|Homo sapiens DNA polymerase kappa pr... 30 6.8
AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein... 30 6.8
AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein... 30 6.8
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 161 bits (392), Expect = 1e-39
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 161 bits (392), Expect = 1e-39
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 161 bits (392), Expect = 1e-39
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 161 bits (392), Expect = 1e-39
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 161 bits (392), Expect = 1e-39
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 161 bits (392), Expect = 1e-39
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 161 bits (392), Expect = 1e-39
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 161 bits (392), Expect = 1e-39
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRRQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 161 bits (392), Expect = 1e-39
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 161 bits (392), Expect = 1e-39
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 152 bits (368), Expect = 1e-36
Identities = 85/196 (43%), Positives = 112/196 (57%), Gaps = 3/196 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GR GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRRRGK 160
Query: 177 RXXXXXXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXX 353
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 NWVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 218
Query: 354 XXXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLR 533
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR
Sbjct: 219 --KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLR 273
Query: 534 ASFGLRSSQFPHRLRF 581
+ F L + +PH+L F
Sbjct: 274 SVFALTNGIYPHKLVF 289
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 151 bits (366), Expect = 2e-36
Identities = 84/195 (43%), Positives = 113/195 (57%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 101 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 160
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R T ++ PLRR Q++VI TSTK+D+ + K+P HL DAYF
Sbjct: 161 RVVFLKQLASGLLLVTDLWSSIEVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF--- 217
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKLVDEAVIKAIRLRPEQKTLRGYLRA 536
Q +IF T+KEKY +EQR DQK VD ++ I+ P+ L+GYLR+
Sbjct: 218 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
Query: 537 SFGLRSSQFPHRLRF 581
F L + +PH+L F
Sbjct: 274 VFALTNGIYPHKLVF 288
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 97.9 bits (233), Expect = 2e-20
Identities = 61/156 (39%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Frame = +3
Query: 3 NGGTRTVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGK 176
NGGTR V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GK
Sbjct: 40 NGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGK 99
Query: 177 RXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXX 356
R TGP + + K K+P HL DAYF
Sbjct: 100 RVVFLKQLASGLLLVTGPLVSIEFLYEEHTRNLSLPLQPKSISAIVKIPKHLTDAYF--- 156
Query: 357 XXXXXXXXXXXQAEDIFATKKEKYVPSEQRMADQKL 464
Q +IF T+KEKY +EQR DQKL
Sbjct: 157 -KKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKL 191
>AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein.
Length = 758
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 202 GNTPTSTTRLPACLPANRMHTVPGVRLGLVLRTCLLKLL 86
G TP+ T+ N+ TV VR G+ L CL+K L
Sbjct: 411 GGTPSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKAL 449
>AK092587-1|BAC03920.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ35268 fis, clone PROST2005285, weakly similar to
CYCLIN G-ASSOCIATED KINASE (EC 2.7.1.-). ).
Length = 251
Score = 30.3 bits (65), Expect = 5.2
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +2
Query: 170 WQACRARWSVAEWSATLH-WTFCFQRVS-PAQDSAALCHWNID*GRPGRFQATGA 328
W C A WS +AT H W+ C S Q C W R G +A GA
Sbjct: 122 WSICCALWSRRLQTATFHPWSICCTTWSRRLQTGTCHCRWAWQPSRTGWPEARGA 176
>U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein
LMX1B/LMX1.2 protein.
Length = 161
Score = 29.9 bits (64), Expect = 6.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 260 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 81
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 81 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 137
Query: 80 RT 75
T
Sbjct: 138 ET 139
>BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 260 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 81
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 80 RT 75
T
Sbjct: 232 ET 233
>BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 260 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 81
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 80 RT 75
T
Sbjct: 232 ET 233
>BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 260 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 81
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 80 RT 75
T
Sbjct: 232 ET 233
>BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein.
Length = 377
Score = 29.9 bits (64), Expect = 6.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 260 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 81
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 173 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 229
Query: 80 RT 75
T
Sbjct: 230 ET 231
>AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 260 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 81
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 80 RT 75
T
Sbjct: 232 ET 233
>AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.9 bits (64), Expect = 6.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 260 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 81
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 198 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 254
Query: 80 RT 75
T
Sbjct: 255 ET 256
>AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 260 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 81
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 80 RT 75
T
Sbjct: 232 ET 233
>AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.9 bits (64), Expect = 6.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 260 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 81
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 198 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 254
Query: 80 RT 75
T
Sbjct: 255 ET 256
>AF315602-1|AAN15780.1| 672|Homo sapiens DNA polymerase kappa
protein.
Length = 672
Score = 29.9 bits (64), Expect = 6.8
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +3
Query: 471 EAVIKAIRLRPEQKTLRGYLRASFGLRSSQFPH 569
+ V+K IR R EQKT L AS G+R S FP+
Sbjct: 291 QEVVKEIRFRIEQKTT---LTASAGVRISSFPN 320
>AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein
protein.
Length = 379
Score = 29.9 bits (64), Expect = 6.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 260 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 81
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 80 RT 75
T
Sbjct: 232 ET 233
>AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein
LMX1B protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.8
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 260 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 81
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 80 RT 75
T
Sbjct: 232 ET 233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,161,705
Number of Sequences: 237096
Number of extensions: 1781834
Number of successful extensions: 4903
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4855
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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