Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L02
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100306-8|ABB88213.1| 860|Caenorhabditis elegans Hypothetical ... 184 3e-47
AF100306-7|ABB88214.1| 895|Caenorhabditis elegans Hypothetical ... 184 3e-47
Z46676-1|CAA86661.1| 799|Caenorhabditis elegans Hypothetical pr... 46 3e-05
X16473-1|CAA34493.1| 799|Caenorhabditis elegans zyg-11 protein ... 46 3e-05
Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 30 1.4
U58735-3|AAC48143.1| 337|Caenorhabditis elegans Hypothetical pr... 29 1.8
U21319-3|AAC46671.2| 265|Caenorhabditis elegans Hypothetical pr... 29 2.4
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF045639-1|AAC02565.1| 672|Caenorhabditis elegans Hypothetical ... 27 9.5
>AF100306-8|ABB88213.1| 860|Caenorhabditis elegans Hypothetical
protein T24C4.6a protein.
Length = 860
Score = 184 bits (449), Expect = 3e-47
Identities = 93/184 (50%), Positives = 117/184 (63%)
Frame = +3
Query: 3 GMEYFLACLKNFPDKEELLRNMMGLLGNVAEVIDLRSKLMDKLFVLVFYELLESSSDGIE 182
G++ F C + F + EL+RNMMGL+GN+AEV +LRS+LM +V +F LLES + IE
Sbjct: 647 GLDLFQKCYEAFKTERELVRNMMGLIGNIAEVDELRSQLMKDDYVKIFCALLESQEESIE 706
Query: 183 VSYNAAGVLVHMASDGPDAWCIDDPPRELVLNRVAAAVERWDLHAERNINYRSFEPILGL 362
+SYN+AGVL HM SDG + W R V+ R+ A W L R INYRSF PIL L
Sbjct: 707 ISYNSAGVLAHMVSDGEEVWKQMTVCRNEVMQRIVEATSSWKLATRRFINYRSFRPILRL 766
Query: 363 LRAYHTPQCQHWAVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHPAPYHLIKKLAWT 542
L YH QHWAVWALANLTT EKYC+ V EGG+ LL +L+ + I+ LA T
Sbjct: 767 LPLYHAYASQHWAVWALANLTTTDGEKYCAYVRDEGGVPLLEELVSNAITTTDIRTLANT 826
Query: 543 VIGN 554
V+ N
Sbjct: 827 VLEN 830
>AF100306-7|ABB88214.1| 895|Caenorhabditis elegans Hypothetical
protein T24C4.6b protein.
Length = 895
Score = 184 bits (449), Expect = 3e-47
Identities = 93/184 (50%), Positives = 117/184 (63%)
Frame = +3
Query: 3 GMEYFLACLKNFPDKEELLRNMMGLLGNVAEVIDLRSKLMDKLFVLVFYELLESSSDGIE 182
G++ F C + F + EL+RNMMGL+GN+AEV +LRS+LM +V +F LLES + IE
Sbjct: 647 GLDLFQKCYEAFKTERELVRNMMGLIGNIAEVDELRSQLMKDDYVKIFCALLESQEESIE 706
Query: 183 VSYNAAGVLVHMASDGPDAWCIDDPPRELVLNRVAAAVERWDLHAERNINYRSFEPILGL 362
+SYN+AGVL HM SDG + W R V+ R+ A W L R INYRSF PIL L
Sbjct: 707 ISYNSAGVLAHMVSDGEEVWKQMTVCRNEVMQRIVEATSSWKLATRRFINYRSFRPILRL 766
Query: 363 LRAYHTPQCQHWAVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHPAPYHLIKKLAWT 542
L YH QHWAVWALANLTT EKYC+ V EGG+ LL +L+ + I+ LA T
Sbjct: 767 LPLYHAYASQHWAVWALANLTTTDGEKYCAYVRDEGGVPLLEELVSNAITTTDIRTLANT 826
Query: 543 VIGN 554
V+ N
Sbjct: 827 VLEN 830
>Z46676-1|CAA86661.1| 799|Caenorhabditis elegans Hypothetical protein
C08B11.1 protein.
Length = 799
Score = 45.6 bits (103), Expect = 3e-05
Identities = 40/178 (22%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Frame = +3
Query: 3 GMEYFLACLKNFPDKEELLRNMMGLLGNVAEVIDLR-SKLMDKLFVLVFYELLESS---- 167
G++ LK F + ++G+L N+AEV +L +L ++ V L+ S
Sbjct: 578 GVQIAFRILKAFDYHGNVQTKVLGILNNLAEVEELHLGQLCKNEYISVLISCLDGSFNEV 637
Query: 168 -SDG----IEVSYNAAGVLVHMASDGPDAWCIDDPPRELVLNRVAAAVERWDLHAERNIN 332
S G +E SY AAG+L ++ ++ D W ++ R+ ++ +E++ ++
Sbjct: 638 DSKGRYREVERSYFAAGILANLLTN-TDGWESENQ-RDEACEKLLELIEQYPTLPSAMVS 695
Query: 333 YRSFEPILGLLRAYHTPQCQHWAVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHP 506
Y+SF P ++R ++ W +W + ++ + EK + +G +++ D + P
Sbjct: 696 YKSFIPFSRIVRESNSNGAIMWCLWGVHHVLQ-HREKNKAPTYEKGYIEMFMDSGLSP 752
>X16473-1|CAA34493.1| 799|Caenorhabditis elegans zyg-11 protein
protein.
Length = 799
Score = 45.6 bits (103), Expect = 3e-05
Identities = 40/178 (22%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Frame = +3
Query: 3 GMEYFLACLKNFPDKEELLRNMMGLLGNVAEVIDLR-SKLMDKLFVLVFYELLESS---- 167
G++ LK F + ++G+L N+AEV +L +L ++ V L+ S
Sbjct: 578 GVQIAFRILKAFDYHGNVQTKVLGILNNLAEVEELHLGQLCKNEYISVLISCLDGSFNEV 637
Query: 168 -SDG----IEVSYNAAGVLVHMASDGPDAWCIDDPPRELVLNRVAAAVERWDLHAERNIN 332
S G +E SY AAG+L ++ ++ D W ++ R+ ++ +E++ ++
Sbjct: 638 DSKGRYREVERSYFAAGILANLLTN-TDGWESENQ-RDEACEKLLELIEQYPTLPSAMVS 695
Query: 333 YRSFEPILGLLRAYHTPQCQHWAVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHP 506
Y+SF P ++R ++ W +W + ++ + EK + +G +++ D + P
Sbjct: 696 YKSFIPFSRIVRESNSNGAIMWCLWGVHHVLQ-HREKNKAPTYEKGYIEMFMDSGLSP 752
>Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical
protein F32H2.1b protein.
Length = 928
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 223 RMAQTLGALTIRPGNLS*TVSPPQSNVGTSTPSGISITVRSN 348
++ +T+ + RP PP+S+ GT TPS +SI SN
Sbjct: 885 KIGETVATVAARPAR------PPRSSAGTPTPSHVSIDTESN 920
>Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical
protein F32H2.1a protein.
Length = 944
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 286 PPQSNVGTSTPSGISITVRSN 348
PP+S+ GT TPS +SI SN
Sbjct: 916 PPRSSAGTPTPSHVSIDTESN 936
>U58735-3|AAC48143.1| 337|Caenorhabditis elegans Hypothetical
protein F20B4.2 protein.
Length = 337
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 459 PLSCNIFPGKRW*GSPMPRRPS 394
P+ C++FPGK W S +RPS
Sbjct: 94 PIRCSMFPGKSWKDSNNLKRPS 115
>U21319-3|AAC46671.2| 265|Caenorhabditis elegans Hypothetical
protein C30G12.2 protein.
Length = 265
Score = 29.1 bits (62), Expect = 2.4
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +3
Query: 3 GMEYFLACLKNFPDKEEL--LRNMMGLLGNVAEVIDLRS--KLMDKLFVLVFYELLESSS 170
G+E +A +N +EL L+N L V D S K+ D++ LV SS
Sbjct: 42 GIELLIATCRNPEKADELNALKNDRRLHVIALNVDDDESIKKVFDEVSSLV-------SS 94
Query: 171 DGIEVSYNAAGVLVHMASDGPDAWCIDDPPRELVLNRVAAAV 296
+G+ + N AG+L+ DGP C ++L N V+ A+
Sbjct: 95 NGLNMLINNAGILLPYEVDGPKI-CRKTMMKQLETNSVSVAI 135
>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical protein
F21H12.6 protein.
Length = 1374
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 9 EYFLACLKNFPDKEELLRNMMGLLGNVAEVIDLRSKLMDKLFVL 140
E+F ACL+ +PD LL+N + L A+++D + + K+ L
Sbjct: 1101 EFFEACLQKYPDHLPLLQNRVKQLMQ-AKLVDQTPENVQKIIEL 1143
>Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical
protein T07C5.1c protein.
Length = 523
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 33 NFPDKEELLRNMMGLLGNVAEVIDLRSKLMDKLFVLVFYELLESSSD 173
+FP E++RN+ +L N E+ DL K V+ +LE+ D
Sbjct: 238 DFPSIAEIIRNVSLVLVNTDEIFDLPRSYSSK---FVYVGMLEAGKD 281
>AF045639-1|AAC02565.1| 672|Caenorhabditis elegans Hypothetical
protein B0212.3 protein.
Length = 672
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -2
Query: 137 YKQFIHQLRPKVNDFSHIAQEA 72
Y++F+ QL PK+ND+++ + EA
Sbjct: 46 YQRFVLQLAPKMNDWNNYSIEA 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,911,866
Number of Sequences: 27780
Number of extensions: 338168
Number of successful extensions: 863
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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