Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_L02
         (576 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   0.54 
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   2.9  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    23   2.9  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    23   2.9  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    23   2.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   3.8  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   5.0  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   6.6  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 441 FPGKRW*GSPMPRRPSAGIGVCGKRVTGPVSV 346
           +P  R  G P  R+P AG+    + +TG ++V
Sbjct: 635 YPDARAMGYPFDRQPRAGVETLAQFLTGNMAV 666


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 233 WAIRGHVDQHTG 198
           W ++GH+  HTG
Sbjct: 56  WLLQGHIRTHTG 67


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 547 ITVQANFFIR*YGAGCTSKSLSNLRPPSASTKLQYF 440
           I   +N FIR + +G  ++S+      S    LQYF
Sbjct: 110 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYF 145


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 547 ITVQANFFIR*YGAGCTSKSLSNLRPPSASTKLQYF 440
           I   +N FIR + +G  ++S+      S    LQYF
Sbjct: 110 IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYF 145


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 547 ITVQANFFIR*YGAGCTSKSLSNLRPPSASTKLQYF 440
           I   +N FIR + +G  ++S+      S    LQYF
Sbjct: 49  IATTSNEFIRIHHSGSITRSIRLTITASCPMNLQYF 84


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 285 AAAVERWDLHAERNINYRSFEP 350
           A  VE +D    RNI YR  +P
Sbjct: 473 ACVVEAFDYLHSRNIIYRDLKP 494


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 543 PSKPISLSDDTERGV 499
           P KP + SD+ +RG+
Sbjct: 137 PGKPTTTSDELKRGI 151


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 33  NFPDKEELLRNMMGLLGNVAEV 98
           N PD+ ++L  + G+LG++  +
Sbjct: 278 NGPDRIDILSQINGILGSLVAI 299


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,051
Number of Sequences: 438
Number of extensions: 4194
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)