Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_L02
(576 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g49310.1 68418.m06102 importin alpha-1 subunit, putative simi... 32 0.24
At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2) sim... 31 0.55
At4g28600.1 68417.m04090 calmodulin-binding protein similar to p... 30 0.96
At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMP... 30 0.96
At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMP... 30 0.96
At4g26250.1 68417.m03778 galactinol synthase, putative similar t... 29 2.2
At3g05720.1 68416.m00640 importin alpha-1 subunit, putative simi... 28 3.9
At5g52000.1 68418.m06453 importin alpha-1 subunit, putative simi... 28 5.1
At5g23790.1 68418.m02793 galactinol synthase, putative similar t... 28 5.1
At3g08810.1 68416.m01023 kelch repeat-containing F-box family pr... 28 5.1
At1g09270.2 68414.m01036 importin alpha-1 subunit, putative (IMP... 28 5.1
At1g09270.1 68414.m01035 importin alpha-1 subunit, putative (IMP... 28 5.1
At4g02150.1 68417.m00287 importin alpha-2 subunit identical to i... 27 9.0
At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr... 27 9.0
>At5g49310.1 68418.m06102 importin alpha-1 subunit, putative similar
to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 519
Score = 32.3 bits (70), Expect = 0.24
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +3
Query: 399 AVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHPAPYHLIKKLAWTVIGNCV 560
A WAL+NL+ E S++EA G + L +LL H +P L+ L IGN V
Sbjct: 260 ACWALSNLSDASNENIQSVIEA-GVVPRLVELLQHASPVVLVPAL--RCIGNIV 310
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 348 PILG-LLRAYHTPQCQHWAVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHPAPYHLI 524
P+L LL H + A W ++N+T E+ S+++A L+N L A + +
Sbjct: 327 PVLADLLTQNHMRGIRREACWTISNITAGLEEQIQSVIDANLIPSLVN--LAQHAEFDIK 384
Query: 525 KKLAWTV 545
K+ W +
Sbjct: 385 KEAIWAI 391
>At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2)
similar to importin alpha 2 [Capsicum annuum]
GI:13752562; contains Pfam profiles PF01749: Importin
beta binding domain, PF00514:
Armadillo/beta-catenin-like repeat; non-consensus GG
donor splice site at exon 1 and 6; CT acceptor splice
site at exon 2
Length = 444
Score = 31.1 bits (67), Expect = 0.55
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +3
Query: 306 DLHAERNINYRSFEPILGLLRAYHTPQCQHWAVWALANLTTVYPEKYCSLVEAEGGLKLL 485
DL + I++ + +L LL H + A W ++N+T ++ ++ EA L+
Sbjct: 321 DLQTQCVISHGALLSLLSLLTHNHKKSIKKEACWTISNITAGNRDQIQAVCEAGLICPLV 380
Query: 486 NDLLVHPAPYHLIKKLAWTV 545
N L+ A + + K+ AW +
Sbjct: 381 N--LLQNAEFDIKKEAAWAI 398
>At4g28600.1 68417.m04090 calmodulin-binding protein similar to
pollen-specific calmodulin-binding protein MPCBP
GI:10086260 from [Zea mays]
Length = 739
Score = 30.3 bits (65), Expect = 0.96
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +3
Query: 138 LVFYELLESSSDGIEVSYNAAGVLVHMASDGPDAWCIDDPPRELVLNRVAAAVERWDLHA 317
+V L E +SD + L P+ W + D PR+ +L+ A + W L
Sbjct: 191 IVETSLAEGASDNVTGDIKLQETLTKAVELLPELWKLADSPRDAILSYRRALLNHWKLDP 250
Query: 318 E 320
E
Sbjct: 251 E 251
>At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 30.3 bits (65), Expect = 0.96
Identities = 22/91 (24%), Positives = 41/91 (45%)
Frame = +3
Query: 273 LNRVAAAVERWDLHAERNINYRSFEPILGLLRAYHTPQCQHWAVWALANLTTVYPEKYCS 452
L V V D+ + IN + + LL H + A W ++N+T ++ +
Sbjct: 305 LRTVGNIVTGDDIQTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNITAGNKDQIQT 364
Query: 453 LVEAEGGLKLLNDLLVHPAPYHLIKKLAWTV 545
+VEA L++ L+ A + + K+ AW +
Sbjct: 365 VVEANLISPLVS--LLQNAEFDIKKEAAWAI 393
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 399 AVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHPAP 512
A WA++N T+ + +G +K L DLLV P P
Sbjct: 389 AAWAISNATSGGSHDQIKYLVEQGCIKPLCDLLVCPDP 426
>At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 30.3 bits (65), Expect = 0.96
Identities = 22/91 (24%), Positives = 41/91 (45%)
Frame = +3
Query: 273 LNRVAAAVERWDLHAERNINYRSFEPILGLLRAYHTPQCQHWAVWALANLTTVYPEKYCS 452
L V V D+ + IN + + LL H + A W ++N+T ++ +
Sbjct: 305 LRTVGNIVTGDDIQTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNITAGNKDQIQT 364
Query: 453 LVEAEGGLKLLNDLLVHPAPYHLIKKLAWTV 545
+VEA L++ L+ A + + K+ AW +
Sbjct: 365 VVEANLISPLVS--LLQNAEFDIKKEAAWAI 393
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 399 AVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHPAP 512
A WA++N T+ + +G +K L DLLV P P
Sbjct: 389 AAWAISNATSGGSHDQIKYLVEQGCIKPLCDLLVCPDP 426
>At4g26250.1 68417.m03778 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 [Ajuga reptans]
GI:5608497; contains Pfam profile: PF01501 glycosyl
transferase family 8
Length = 336
Score = 29.1 bits (62), Expect = 2.2
Identities = 9/47 (19%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 207 LVHMASDGPDAWCIDDPPRELVLNRVAAAVER-WDLHAERNINYRSF 344
++H ++G W D+ + + V++ WD++ + +++Y++F
Sbjct: 258 VIHYCANGSKPWRFDETEEHMDREDIKMLVKKWWDIYEDSSLDYKNF 304
>At3g05720.1 68416.m00640 importin alpha-1 subunit, putative similar
to importin alpha subunit (Karyopherin alpha subunit)
(KAP alpha) SP:O22478 from [Lycopersicon esculentum]
Length = 528
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 378 TPQCQHWAVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHPAPYHLIKKLAWTVIGN 554
+PQ Q A WAL N+ + E +V G + +L LL +PY ++++ +GN
Sbjct: 117 SPQLQFEAAWALTNIASGTSEN-TEVVIDHGAVAILVRLL--NSPYDVVREQVVWALGN 172
>At5g52000.1 68418.m06453 importin alpha-1 subunit, putative similar
to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 441
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 327 INYRSFEPILGLLRAYHTPQCQHWAVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHP 506
IN + I +L H + + A W ++N+T E+ S+++A L+N L
Sbjct: 251 INSGALPIISNMLTRNHENKIKKCACWVISNITAGTKEQIQSVIDANLIPILVN--LAQD 308
Query: 507 APYHLIKKLAWTV 545
+++ K+ W +
Sbjct: 309 TDFYMKKEAVWAI 321
>At5g23790.1 68418.m02793 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 GI:5608497 from
[Ajuga reptans]; contains Pfam profile: PF01501 glycosyl
transferase family 8
Length = 333
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/47 (19%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 207 LVHMASDGPDAWCIDDPPRELVLNRVAAAVER-WDLHAERNINYRSF 344
+VH ++G W D+ + + V++ W+++ + +++Y++F
Sbjct: 255 VVHYCANGSKPWKFDEAEEHMDREDIKMLVKKWWEIYEDSSLDYKNF 301
>At3g08810.1 68416.m01023 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 343
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 372 YHTPQCQHWAVWALANLTT-VYPEKYCSLVEAEGGLKLLNDLLVHPAPYHLIKKLAWTV 545
+ T QC AV AL T+ V+ EK C + G ++ ++DLL P Y L+K L T+
Sbjct: 291 HKTIQC---AVIALERRTSFVFREKSCQIW---GKVEWVDDLLTVPTSYDLVKVLVATL 343
>At1g09270.2 68414.m01036 importin alpha-1 subunit, putative (IMPA4)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 538
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 399 AVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHPAP 512
A WA++N T+ + + +G +K L DLL+ P P
Sbjct: 396 AAWAISNATSGGSHEQIQYLVTQGCIKPLCDLLICPDP 433
>At1g09270.1 68414.m01035 importin alpha-1 subunit, putative (IMPA4)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 538
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 399 AVWALANLTTVYPEKYCSLVEAEGGLKLLNDLLVHPAP 512
A WA++N T+ + + +G +K L DLL+ P P
Sbjct: 396 AAWAISNATSGGSHEQIQYLVTQGCIKPLCDLLICPDP 433
>At4g02150.1 68417.m00287 importin alpha-2 subunit identical to
importin alpha-2 subunit (Karyopherin alpha-2 subunit)
(KAP alpha) SP:O04294 from [Arabidopsis thaliana]
Length = 531
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/80 (21%), Positives = 42/80 (52%)
Frame = +3
Query: 306 DLHAERNINYRSFEPILGLLRAYHTPQCQHWAVWALANLTTVYPEKYCSLVEAEGGLKLL 485
DL + ++ ++ +L LL+ + + A W ++N+T ++ ++++A G ++ L
Sbjct: 319 DLQTQMVLDQQALPCLLNLLKNNYKKSIKKEACWTISNITAGNADQIQAVIDA-GIIQSL 377
Query: 486 NDLLVHPAPYHLIKKLAWTV 545
+L A + + K+ AW +
Sbjct: 378 VWVL-QSAEFEVKKEAAWGI 396
>At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family
protein / kinesin motor family protein similar to
kinesin-like protein GB:CAB41097 GI:5541717 from
[Arabidopsis thaliana]; contains Pfam profiles PF00225:
Kinesin motor domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 894
Score = 27.1 bits (57), Expect = 9.0
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +3
Query: 249 DDPPRELVLNRVAAAVERWDLHAERNINYRSFEPILGLLRAYHTPQCQHWAVWALANLTT 428
DD + +V A + + + E+ + +L LLR+Y + A A+ANL
Sbjct: 648 DDANIRIHAVKVVANLAAEEANQEKIVEAGGLTSLLMLLRSYEDETVRRVAAGAIANL-- 705
Query: 429 VYPEKYCSLVEAEGGLKLLN 488
E L+ +GG+ LL+
Sbjct: 706 AMNEVSQQLIVDQGGISLLS 725
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,274,882
Number of Sequences: 28952
Number of extensions: 323634
Number of successful extensions: 820
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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