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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_L01
         (570 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si...    43   1e-04
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si...    42   4e-04
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si...    39   0.002
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si...    39   0.002
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si...    38   0.004
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si...    37   0.008
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si...    37   0.008
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si...    36   0.025
At3g16460.2 68416.m02097 jacalin lectin family protein contains ...    31   0.72 
At3g16460.1 68416.m02098 jacalin lectin family protein contains ...    31   0.72 
At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family pr...    30   1.2  
At1g30220.1 68414.m03697 sugar transporter family protein simila...    29   1.7  
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si...    29   2.9  
At4g34350.1 68417.m04881 LytB family protein contains Pfam profi...    28   3.8  
At4g25390.2 68417.m03653 protein kinase family protein contains ...    28   5.0  
At4g25390.1 68417.m03652 protein kinase family protein contains ...    28   5.0  
At4g20190.1 68417.m02952 hypothetical protein                          27   6.7  
At2g46530.2 68415.m05803 transcriptional factor B3 family protei...    27   6.7  
At2g46530.1 68415.m05802 transcriptional factor B3 family protei...    27   6.7  
At5g65630.1 68418.m08256 DNA-binding bromodomain-containing prot...    27   8.8  
At5g57000.1 68418.m07114 expressed protein similar to unknown pr...    27   8.8  
At2g43330.1 68415.m05388 sugar transporter family protein simila...    27   8.8  
At2g36730.1 68415.m04506 pentatricopeptide (PPR) repeat-containi...    27   8.8  

>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
           similar to chitinase/lysozyme GI:467689 from [Nicotiana
           tabacum]
          Length = 379

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 43/160 (26%), Positives = 60/160 (37%)
 Frame = +2

Query: 8   APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHAD 187
           A ++ P N  P  + DA    WIQ G P  K VLG    G  W+L + +  S   P    
Sbjct: 223 AALFDPSNAGP--SGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAP---T 277

Query: 188 EGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEG 367
            G    P     G + Y +I   +++   NG           S   G Y +        G
Sbjct: 278 TGAAISP----DGSIGYGQIRKFIVD---NGATTVYN-----STVVGDYCY-------AG 318

Query: 368 GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGL 487
             W+ Y+D  +   K  Y K + L G     +  DD  GL
Sbjct: 319 TNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGL 358


>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 398

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 41/167 (24%), Positives = 66/167 (39%)
 Frame = +2

Query: 8   APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHAD 187
           A +Y P +    ++ D+ +  W + G P  K VLG    G  W L +D +++G       
Sbjct: 202 ASLYLPTDG---RSGDSGVRDWTEAGLPAKKAVLGFPYYGWAWTL-ADPDVNGY------ 251

Query: 188 EGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEG 367
           +    GP     G +SY ++   +++   NG      KV+D     G Y +        G
Sbjct: 252 DANTTGPAISDDGEISYRQLQTWIVD---NG----ATKVHD-DMMVGDYCY-------AG 296

Query: 368 GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYP 508
             W+ Y+   +   K  Y K K L G     +  DD   L +    P
Sbjct: 297 TTWIGYDSEKSIVTKVIYAKQKGLLGYFSWHVGGDDNSELSSAGSTP 343


>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 362

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 41/168 (24%), Positives = 69/168 (41%)
 Frame = +2

Query: 8   APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHAD 187
           A ++ P N    ++ D+ ++ W++   P  K VLG S  G  W L+ D+E +G       
Sbjct: 211 AALFDPSNPAG-RSGDSGLSKWLEAKLPAKKAVLGFSYCGWAWTLE-DAENNGY------ 262

Query: 188 EGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEG 367
           +    G      G ++Y +I   +I+   NG        +DP+   G Y +        G
Sbjct: 263 DAATDGAAISSDGSITYAKIRNYIID---NG----AATFHDPAV-IGFYCY-------VG 307

Query: 368 GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYPI 511
             W+ Y+D  +  +K  Y K K L G     +  D   GL     + +
Sbjct: 308 TTWIGYDDNQSIVSKVRYAKLKGLLGYFSWHVGADYNCGLSRAGSFSL 355


>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:505267 from [Nicotiana
           tabacum]
          Length = 332

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 36/136 (26%), Positives = 56/136 (41%)
 Frame = +2

Query: 5   TAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHA 184
           TA ++   N +   + D+ +  WI++G P  K VLG S  G  W L +D + +G     A
Sbjct: 214 TAGLHVSSNNEG-PSGDSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQNDKD-TGYNAAAA 271

Query: 185 DEGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGE 364
                    ++  G ++Y +I       N+  +     KV DP K  G Y F        
Sbjct: 272 GVAKSEDDVSE-DGSINYAQI-------NKFIRDEEAAKVYDP-KVVGHYCFAKK----- 317

Query: 365 GGFWVSYEDPDTAGNK 412
              W+ YED  +   K
Sbjct: 318 --IWIGYEDTQSVEAK 331


>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 363

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 47/182 (25%), Positives = 69/182 (37%), Gaps = 2/182 (1%)
 Frame = +2

Query: 8   APIYAPQN-RDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHA 184
           A ++ P N + P    D  +  WI+ G P  K VLG    G TW L S            
Sbjct: 210 AALFDPSNPKGPC--GDYGLKEWIKAGLPAKKAVLGFPYVGWTWSLGS-----------G 256

Query: 185 DEGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGE 364
           ++   +   T  +G ++Y +I   +++          R V D S   G Y F        
Sbjct: 257 NDAATSRVATSAEGSINYDQIKRLIVDHK-------ARPVFD-STVVGDYCF-------A 301

Query: 365 GGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLC-TGDKYPILRAAKYRL*T 541
           G   + Y+D  +   K  Y K K L G     +  DD  GL   G  +    +  + L T
Sbjct: 302 GTSLIGYDDHQSVVAKVKYAKQKGLLGYFSWHVGADDNFGLSRAGSSFCTYESLFFSLFT 361

Query: 542 FS 547
           FS
Sbjct: 362 FS 363


>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
           similar to chitinase/lysozyme GI:467689 from [Nicotiana
           tabacum]
          Length = 366

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 25/80 (31%), Positives = 34/80 (42%)
 Frame = +2

Query: 8   APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHAD 187
           AP+Y P    P  + DA +  W Q G P  K VLG    G  W L +D++       H  
Sbjct: 221 APLYDPITTGP--SGDAGVRAWTQAGLPAKKAVLGFPLYGYAWCL-TDAK------NHNY 271

Query: 188 EGGEAGPYTKVQGLLSYPEI 247
               +GP     G + Y +I
Sbjct: 272 YANSSGPAISPDGSIGYDQI 291


>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 289

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +2

Query: 8   APIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 157
           A +Y P  + P    D  + +W++ G P  K V G    G +W LD D +
Sbjct: 191 AGLYDPSIKGPC--GDTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDDKD 238


>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 261

 Score = 35.5 bits (78), Expect = 0.025
 Identities = 36/154 (23%), Positives = 54/154 (35%)
 Frame = +2

Query: 47  NADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQG 226
           + D+ +  WI  G P  K VLG    G  W L         P  H       GP     G
Sbjct: 125 SGDSGVKDWIDAGLPAEKAVLGFPYYGWAWTLAD-------PKNHGYYVDTTGPAISDDG 177

Query: 227 LLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAG 406
            +SY ++   +++            V+D +   G Y +        G  W+ Y+  ++  
Sbjct: 178 EISYSQLKTWIVDNKAT-------TVHD-NIVIGDYCY-------AGTTWIGYDSEESIV 222

Query: 407 NKASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYP 508
            K  Y K K L G     +  DD   L +    P
Sbjct: 223 TKVIYAKQKGLLGYFSWQVGGDDKSELSSAGSSP 256


>At3g16460.2 68416.m02097 jacalin lectin family protein contains
           Pfam profile: PF01419 jacalin-like lectin domain;
           similar to myrosinase binding protein [Brassica napus]
           GI:1711296, GI:1655824, myrosinase-binding protein
           homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
           profile PF01419 jacalin-like lectin family
          Length = 647

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
 Frame = +2

Query: 83  GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQGLLSYPEICAKL 259
           G+   KL   G ST G +W  D  S+  GV  I+A  GGE   Y K   +         L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306

Query: 260 INPNQNGKRPHLRKVNDPSK 319
               Q+ + P    +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326


>At3g16460.1 68416.m02098 jacalin lectin family protein contains
           Pfam profile: PF01419 jacalin-like lectin domain;
           similar to myrosinase binding protein [Brassica napus]
           GI:1711296, GI:1655824, myrosinase-binding protein
           homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
           profile PF01419 jacalin-like lectin family
          Length = 705

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
 Frame = +2

Query: 83  GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQGLLSYPEICAKL 259
           G+   KL   G ST G +W  D  S+  GV  I+A  GGE   Y K   +         L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306

Query: 260 INPNQNGKRPHLRKVNDPSK 319
               Q+ + P    +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326


>At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family
           protein bHLH protein, Arabidopsis thaliana,
           PATCHX:E255557
          Length = 589

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = +2

Query: 305 NDPSKRFGTYAFRLPDDXGEG--GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDF 478
           N+    FG++AF L  D GE   G W+S  +   +G  A+ V   N G  S  +      
Sbjct: 253 NNGGGEFGSWAFNLNPDQGENDPGLWISEPNGVDSGLVAAPV-MNNGGNDSTSNSDSQPI 311

Query: 479 RGLCTG 496
             LC G
Sbjct: 312 SKLCNG 317


>At1g30220.1 68414.m03697 sugar transporter family protein similar
           to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
           [Homo sapiens]; contains Pfam profile PF00083: major
           facilitator superfamily protein
          Length = 580

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 36  ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 146
           ++Y +PT++ + GF   R    LSLV+A L+  GS I
Sbjct: 294 VMYYSPTIVQLAGFASNRTALLLSLVTAGLNAFGSII 330


>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:505267 from [Nicotiana
           tabacum]
          Length = 365

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
 Frame = +2

Query: 44  QNADAAINYWIQNGA-PTHKLVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKV 220
           ++ ++ +  W+     P  K VLG    G  W L+ D+E +G     A +G    P    
Sbjct: 231 RSGNSGLRKWLDEAKLPPKKAVLGFPYCGWAWTLE-DAENNGYDA--ATDGAAISP---- 283

Query: 221 QGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDT 400
            G ++Y +I   +++   NG        +DP+   G Y +        G  W+ Y+D  +
Sbjct: 284 DGSITYAKIRNYIVD---NGAATF----HDPAV-IGFYCY-------VGNTWIGYDDNQS 328

Query: 401 AGNKASYVKTKNLGG 445
              K  Y K   L G
Sbjct: 329 IVYKVKYAKFTGLLG 343


>At4g34350.1 68417.m04881 LytB family protein contains Pfam profile:
           PF02401 LytB protein
          Length = 466

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +2

Query: 101 LVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGPYTKVQGLLSYPEICAK 256
           LV+G   +  T  L   SE  G+P    D     GP  K+   L Y E+  K
Sbjct: 372 LVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEK 423


>At4g25390.2 68417.m03653 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 497

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +2

Query: 263 NPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLG 442
           N + + +RP  R+ +  S R  T +F   +  G+GGF V +    + G   + VK  + G
Sbjct: 74  NASSSPRRPSPREFSYSSLRRATGSFSQANRLGQGGFGVVFRGTISGGENVA-VKVMDSG 132

Query: 443 GV 448
            +
Sbjct: 133 SL 134


>At4g25390.1 68417.m03652 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 651

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +2

Query: 263 NPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLG 442
           N + + +RP  R+ +  S R  T +F   +  G+GGF V +    + G   + VK  + G
Sbjct: 74  NASSSPRRPSPREFSYSSLRRATGSFSQANRLGQGGFGVVFRGTISGGENVA-VKVMDSG 132

Query: 443 GV 448
            +
Sbjct: 133 SL 134


>At4g20190.1 68417.m02952 hypothetical protein 
          Length = 389

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 19/88 (21%), Positives = 34/88 (38%)
 Frame = -3

Query: 496 SSAKTTKIIHGKVHDGHTAKVLCFHVTSFVSGRVRIFVRNPEATFTXIIRKAEGIGPKTF 317
           S+   +K I+    DG     LC ++  F  G+     R  +++FT   R       ++ 
Sbjct: 195 SNTANSKSINS-FEDGFKCSALCLYLPGFSKGKPVRSSRKGDSSFT---RTTTMTSSQSM 250

Query: 316 ARIVDLTKMRTLSVLVGVNKFGANFWVA 233
           AR   +     LS    + +F    W +
Sbjct: 251 ARTASIRDTAVLSARASLERFECGSWTS 278


>At2g46530.2 68415.m05803 transcriptional factor B3 family protein /
           auxin-responsive factor AUX/IAA-related contains Pfam
           profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
           domain
          Length = 514

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 240 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 350
           + F+P+ LTPT T+      RS  ++ + G P+ S+FL
Sbjct: 263 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 300


>At2g46530.1 68415.m05802 transcriptional factor B3 family protein /
           auxin-responsive factor AUX/IAA-related contains Pfam
           profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
           domain
          Length = 601

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 240 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 350
           + F+P+ LTPT T+      RS  ++ + G P+ S+FL
Sbjct: 350 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 387


>At5g65630.1 68418.m08256 DNA-binding bromodomain-containing protein
           similar to 5.9 kb fsh membrane protein [Drosophila
           melanogaster] GI:157455; contains Pfam profile PF00439:
           Bromodomain
          Length = 590

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 263 NPNQNGKRPHLRKVNDPSKRFGTYA 337
           NPN N +R +  K  D S  FG+YA
Sbjct: 44  NPNPNFERSNSSKQCDDSSEFGSYA 68


>At5g57000.1 68418.m07114 expressed protein similar to unknown
           protein (gb|AAF21159.1)
          Length = 187

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 389 LRKKPRSHLHHXHQE 345
           L++KP  HLHH H+E
Sbjct: 87  LKEKPPRHLHHHHKE 101


>At2g43330.1 68415.m05388 sugar transporter family protein similar
           to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
           [Homo sapiens], SP|Q01440 Membrane transporter D1
           {Leishmania donovani}; contains Pfam profile PF00083:
           major facilitator superfamily protein
          Length = 509

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +3

Query: 12  RFTHRRTAILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 146
           +FT   T ++Y +PT++ + GF   +L   LSL+ A ++  G+ +
Sbjct: 287 QFTGINT-VMYYSPTIVQMAGFHSNQLALFLSLIVAAMNAAGTVV 330


>At2g36730.1 68415.m04506 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 501

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 340 EGIGPKTFARIVDLTKMRTLSVLVGVNKFG-ANFW 239
           EGIG K   R+++L   R+ ++++  N+F  A  W
Sbjct: 401 EGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMW 435


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,584,641
Number of Sequences: 28952
Number of extensions: 309731
Number of successful extensions: 838
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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