Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K23
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   7.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   7.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 259  SDYNGPRESNGIVKYMRAQVGPSSRD 336
            + +  P E NGIV+Y      P S D
Sbjct: 1219 ASWKPPVEPNGIVEYYTVYYKPVSTD 1244


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -2

Query: 562 QTCSEDAWDGIIRHCSCI 509
           Q C+ +A + +  HC C+
Sbjct: 138 QVCTPNATNTVWSHCQCV 155


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -2

Query: 562 QTCSEDAWDGIIRHCSCI 509
           Q C+ +A + +  HC C+
Sbjct: 138 QVCTPNATNTVWSHCQCV 155


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -2

Query: 169 LLLLMILEDRLSLVYRQLQRIQVSNAYNDRTMVRKT 62
           LLL+    D +S    +  R    N YND  + R T
Sbjct: 10  LLLMFSYTDNVSSTRTKYLRTNFPNFYNDFEVQRYT 45


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 295 VKYMRAQVGPSSRDLLTLADFEAFTAKDD 381
           VKY  +   PS++ +L L  F    A DD
Sbjct: 280 VKYWMSNGAPSAKIVLGLPTFGRAWAMDD 308


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -3

Query: 405 FKETNDNNI 379
           +K+TNDNN+
Sbjct: 374 YKDTNDNNV 382


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 477 VSKCNLFSHFISSLEEVSFKIRLLFKETNDN 385
           VSK +  S  +S LE+   +  L+F ET  N
Sbjct: 391 VSKFDKRSKLVSILEKAPNERTLIFVETKRN 421


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.134    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,981
Number of Sequences: 336
Number of extensions: 2620
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)