Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_K22
(276 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 29 0.47
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 28 0.82
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 27 2.5
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 2.5
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 26 3.3
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 26 3.3
AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical ... 26 3.3
Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical pr... 26 4.4
AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical ... 26 4.4
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 25 7.7
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 25 7.7
AF036701-5|AAB88367.1| 125|Caenorhabditis elegans Hypothetical ... 25 7.7
AF014940-10|AAK73900.1| 243|Caenorhabditis elegans Hypothetical... 25 7.7
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 29.1 bits (62), Expect = 0.47
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 113 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 229
V A P P F+ P+ P PI GPAF P P
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAP 148
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 28.3 bits (60), Expect = 0.82
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 113 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 229
V A P P F+ P+ P P+ GPAF P P
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAP 161
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 125 PDPFFSQPSNGPSGNYEPIS 184
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 125 PDPFFSQPSNGPSGNYEPIS 184
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 26.2 bits (55), Expect = 3.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 128 DPFFSQPSNGPSGNYEPISTGPA 196
DP +QPS GP G + P P+
Sbjct: 306 DPSGAQPSGGPPGPFNPSGAPPS 328
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 26.2 bits (55), Expect = 3.3
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 122 NPDPFFSQPS-NGPSGNYEPISTGPAFVDFNHPNYPPK 232
NP P PS NGPS +P GP+ N P+ P K
Sbjct: 939 NPGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNK 976
>AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.4a protein.
Length = 527
Score = 26.2 bits (55), Expect = 3.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 95 GNSDHVVIANPDPFFSQPSNGPSG 166
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSGG 499
>Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 77 NRVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 205
NR+P + SD I P P QP G + P ST +++
Sbjct: 383 NRLPGEETSDSSSIVLPSPVEIQPKGGIVNSSMP-STSTGYIN 424
>Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 77 NRVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 205
NR+P + SD I P P QP G + P ST +++
Sbjct: 383 NRLPGEETSDSSSIVLPSPVEIQPKGGIVNSSMP-STSTGYIN 424
>AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.5a protein.
Length = 527
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 95 GNSDHVVIANPDPFFSQPSNGPSG 166
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSRG 499
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 25.0 bits (52), Expect = 7.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 101 SDHVVIANPDP 133
SDH++IA PDP
Sbjct: 519 SDHIIIATPDP 529
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 25.0 bits (52), Expect = 7.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 101 SDHVVIANPDP 133
SDH++IA PDP
Sbjct: 519 SDHIIIATPDP 529
>AF036701-5|AAB88367.1| 125|Caenorhabditis elegans Hypothetical
protein ZC416.2 protein.
Length = 125
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 119 ANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYP 226
A P P++ + P G+ + GP + +PN P
Sbjct: 10 AQPQPYYGNANYAPQGSNPYPAQGPYPQGYYNPNQP 45
>AF014940-10|AAK73900.1| 243|Caenorhabditis elegans Hypothetical
protein W02D7.10 protein.
Length = 243
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/54 (22%), Positives = 22/54 (40%)
Frame = +2
Query: 89 SDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDXPL 250
SDG++ ++ P P P ++P++ G V P + K P+
Sbjct: 178 SDGSASEQMV--PQPEVIAPGGKALYTFDPVARGRGIVRIMEPTFASKNVSIPI 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,374,125
Number of Sequences: 27780
Number of extensions: 117736
Number of successful extensions: 307
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -