Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K21
         (91 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0449 - 3392512-3393504                                           26   4.8  
08_01_0123 + 974941-975186,975274-977505                               25   6.3  

>07_01_0449 - 3392512-3393504
          Length = 330

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 36 APGLCDPVRTDDSVEFRE 89
          APG   PVR D SVE+++
Sbjct: 28 APGFATPVRDDGSVEWKD 45


>08_01_0123 + 974941-975186,975274-977505
          Length = 825

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 85  RNSTESSVLTGSHNPGAKMSANTNKL 8
           R + + SV   SHN GA  +ANTN L
Sbjct: 595 RLAIDGSVEPTSHNAGAIQAANTNIL 620


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,930,444
Number of Sequences: 37544
Number of extensions: 11695
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 14,793,348
effective HSP length: 11
effective length of database: 14,380,364
effective search space used: 258846552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)