Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K20
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   8.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   8.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.6  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 258 DDSVXGXITGDEDNVLDAKDHLLNLAEE 341
           DD V   +   E   LD  +HL++L E+
Sbjct: 62  DDGVVSVLDDWEITGLDEMNHLMSLREK 89


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 239 YVHLELVHNTTYILSPQPNQS 177
           +VH  +VHN    L P P  S
Sbjct: 72  FVHSGMVHNDGTQLMPSPTVS 92


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 239 YVHLELVHNTTYILSPQPNQS 177
           +VH  +VHN    L P P  S
Sbjct: 72  FVHSGMVHNDGTQLMPSPTVS 92


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 522 VSGARCSHGPPFTTK 478
           VSG RC +G P ++K
Sbjct: 134 VSGLRCVNGIPVSSK 148


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 522 VSGARCSHGPPFTTK 478
           VSG RC +G P ++K
Sbjct: 134 VSGLRCVNGIPVSSK 148


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 309 HRARCLHHP*SXHXRYHHHVSGN 241
           H     HH  + H   +HHV+ N
Sbjct: 322 HHHHAGHHIHAQHHVVNHHVAAN 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,717
Number of Sequences: 336
Number of extensions: 2903
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)