SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K20
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr...   100   8e-22
U80444-7|AAO12447.1|  380|Caenorhabditis elegans Hypothetical pr...    33   0.13 
U80444-5|AAB37791.1|  397|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z68337-3|CAA92750.2|  712|Caenorhabditis elegans Hypothetical pr...    33   0.17 
AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical ...    32   0.40 
Z81124-14|CAJ85776.1|  360|Caenorhabditis elegans Hypothetical p...    28   4.9  
Z81124-13|CAJ85775.1|  362|Caenorhabditis elegans Hypothetical p...    28   4.9  
U97403-4|AAB52474.2|  445|Caenorhabditis elegans Hypothetical pr...    27   8.5  
AL023844-8|CAA19534.1|  396|Caenorhabditis elegans Hypothetical ...    27   8.5  

>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical protein
            C08H9.2 protein.
          Length = 1220

 Score =  100 bits (240), Expect = 8e-22
 Identities = 52/124 (41%), Positives = 81/124 (65%), Gaps = 2/124 (1%)
 Frame = +3

Query: 6    FGVQINLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLI 185
            +GV IN+P+  E  ++ ITIQGYEEKA +   AI  ++ +L +   +E+ +D R H RLI
Sbjct: 1036 YGVIINVPR--EDGNETITIQGYEEKANECAAAIEEMISELRSMFTQEISLDARYHPRLI 1093

Query: 186  GLRGKNIRRIMDEFKVDIRFPKHG-DDSVXGXITG-DEDNVLDAKDHLLNLAEEYLQDVA 359
            G RGKN++++M++++V+IR P+ G +D     + G DE++V D  DHL    EE+L D  
Sbjct: 1094 GQRGKNLKKVMEDYRVEIRLPRQGAEDPNLVVVAGKDENDVYDCIDHLRAEEEEFLLDNV 1153

Query: 360  DRYQ 371
            +R Q
Sbjct: 1154 ERTQ 1157



 Score = 61.3 bits (142), Expect = 6e-10
 Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
 Frame = +3

Query: 12   VQINLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIGL 191
            V++  PK G+ + + I + G +E   +AK A+   + QL      ++ +DP+ ++  +  
Sbjct: 742  VRVMFPKEGDAEKETIHLLGKKEDVPKAKAALEDAIKQLSETVDIKITVDPKYYKNFLAR 801

Query: 192  RGKNIRRIMDEFK-VDIRFPKHGDDSVXGXITGDEDNVLDAKDHLLNLAEEYLQDVADRY 368
                ++ I ++   V I FPK+G DS    I G +  V  AK+ + ++ E+Y + + D  
Sbjct: 802  GAALVKEIQEQNGGVVISFPKNGTDSSEVSIRGSKQCVEAAKNRIEDVVEDYEKQITDNV 861

Query: 369  QAPA 380
              PA
Sbjct: 862  TIPA 865



 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
 Frame = +3

Query: 9   GVQINLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIG 188
           GVQI +P   E + D I ++G +E   +A   I AIV +++N+   ++ I  R+H+ +IG
Sbjct: 449 GVQITIPNE-ETNSDEIVVEGKKEGVKKAVTEIRAIVTKIENEKSRDIIIPQRLHKLIIG 507

Query: 189 LRGKNIRRIMDEF-KVDIRFPKHGDDSVXGXITGDEDNVLDAKDHLLNLAEEYLQD 353
            +G  ++ I D    V + FP     S    I GD+  V      L  L++EY ++
Sbjct: 508 SKGSGVQVIRDSHPNVSVVFPDAKSKSDVVNIRGDKTEVDAVYKKLTALSKEYAEN 563



 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
 Frame = +3

Query: 9    GVQINLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIG 188
            GV I+ PK G  D   ++I+G ++    AK+ I  +V   + Q  + V I  + HR L+ 
Sbjct: 815  GVVISFPKNGT-DSSEVSIRGSKQCVEAAKNRIEDVVEDYEKQITDNVTIPAQFHRGLLA 873

Query: 189  LRGKNIRRIMDEFKVDIRFPKHGDDSVXG----XITGDEDNVLDAKDHLL 326
             RG  I  +  ++ V IRFP + ++   G     ++G +  V +AK+ LL
Sbjct: 874  GRGAKIHELQSKYNVSIRFPNNREEGSEGSDQVTVSGRDTKVEEAKEALL 923



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
 Frame = +3

Query: 6    FGVQINLP---KRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHR 176
            + V I  P   + G    D +T+ G + K  +AK+A++A+V        + + +   +HR
Sbjct: 886  YNVSIRFPNNREEGSEGSDQVTVSGRDTKVEEAKEALLAMV-----PISKVIQLPVDMHR 940

Query: 177  RLIGLRGKNIRRIMDEFKVDIRFPKHGDDSVXGXITGDEDNVLDAKDHLLNLAEEYLQDV 356
             +IG  G+ +R++M ++ V+I  PK  + S    +TG  +NV  A + L     EY    
Sbjct: 941  SIIGRGGETVRKLMQDYDVNISIPK-DNSSEDITVTGQTENVDQALEALRGKLGEYEAQA 999

Query: 357  ADR 365
             DR
Sbjct: 1000 EDR 1002



 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 31/100 (31%), Positives = 47/100 (47%)
 Frame = +3

Query: 39  EPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIGLRGKNIRRIM 218
           E  D  +T+    E+A +A++A   I+  L  Q   E+DI    H RLIG  G  +R + 
Sbjct: 104 ESKDGELTVVVKGERA-KAEEARARIIRDLQTQASREIDIPKDHHGRLIGKEGALLRNLE 162

Query: 219 DEFKVDIRFPKHGDDSVXGXITGDEDNVLDAKDHLLNLAE 338
            E    I+ P     S    ITG  + +  A  H+L ++E
Sbjct: 163 AETNCRIQIPNRDGPSSKITITGPREGIQRAAAHILAVSE 202



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
 Frame = +3

Query: 9    GVQINLPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLD-NQCKEEVDIDPRVHRRLI 185
            GV I  P   + +   +TI+G      +A   + A+    + N  ++ V   P  HR LI
Sbjct: 668  GVHIRFPSE-KSESTKVTIRGPAGDVAKAVGLLSALAKDKEENYVEDTVKAKPEFHRFLI 726

Query: 186  GLRGKNIRRIMDEFKVDIRFPKHGD-DSVXGXITGDEDNVLDAKDHLLNLAEEYLQDV 356
            G  G  I ++ D   V + FPK GD +     + G +++V  AK  L +  ++  + V
Sbjct: 727  GKGGSKIAKLRDTLNVRVMFPKEGDAEKETIHLLGKKEDVPKAKAALEDAIKQLSETV 784



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
 Frame = +3

Query: 51  DIITIQGYEEKALQAKDAIMAIVHQL-DNQCKEEVDIDPRVHRRLIGLRGKNIRRIMDEF 227
           D++ I+G + +       + A+  +  +N  ++ V I     + ++G  G +IR++ DE 
Sbjct: 535 DVVNIRGDKTEVDAVYKKLTALSKEYAENNYQQTVAIFKEFLKHIVGKGGASIRKLRDET 594

Query: 228 KVDIRFPKHGDDSVXGXITGDEDNVLDAKDHLLNLAEEYLQDVADRYQAPAAPSLADFGS 407
           +  I  P+ G D     +TG + NV  A   L  + EE      +  + P       FG+
Sbjct: 595 ETRIDLPESGSDDGKITVTGKQANVEKAVAQLNKIQEELANVAEESIEIPQKVQSRFFGN 654


>U80444-7|AAO12447.1|  380|Caenorhabditis elegans Hypothetical
           protein F26B1.2c protein.
          Length = 380

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
 Frame = +3

Query: 180 LIGLRGKNIRRIMDEFKVDIRFPKHGDDSVXGXITGDEDNVLD-AKDHLLNLAEEYLQDV 356
           +IG  G+NI+R+  EF   ++ P          +T DE  VL+  KD L  L + + +  
Sbjct: 47  IIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNFSE-- 104

Query: 357 ADRYQAPAAPSLADFGSVLNENSSTGSVERTRIPERL 467
            D  +       +  G+++  N S     R +   RL
Sbjct: 105 RDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARL 141


>U80444-5|AAB37791.1|  397|Caenorhabditis elegans Hypothetical
           protein F26B1.2a protein.
          Length = 397

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
 Frame = +3

Query: 180 LIGLRGKNIRRIMDEFKVDIRFPKHGDDSVXGXITGDEDNVLD-AKDHLLNLAEEYLQDV 356
           +IG  G+NI+R+  EF   ++ P          +T DE  VL+  KD L  L + + +  
Sbjct: 64  IIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNFSE-- 121

Query: 357 ADRYQAPAAPSLADFGSVLNENSSTGSVERTRIPERL 467
            D  +       +  G+++  N S     R +   RL
Sbjct: 122 RDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARL 158


>Z68337-3|CAA92750.2|  712|Caenorhabditis elegans Hypothetical
           protein M7.3 protein.
          Length = 712

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
 Frame = +3

Query: 48  DDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLIGLRGKNIRRIMDEF 227
           D  + + G  E+   A+  ++  +     +   ++++   +H  +IG  G+ I+++M   
Sbjct: 74  DPYVKVIGSIEQIESARTLVLNSLQIKKERVSLKMELHHSLHSHIIGKGGRGIQKVMKMT 133

Query: 228 KVDIRFP---KHGDDSVXG--XITGDEDNVLDAKDHLLNL 332
              I FP   K+ D +      I+G   NV +A  HL ++
Sbjct: 134 SCHIHFPDSNKYSDSNKSDQVSISGTPVNVFEALKHLRSM 173


>AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical
           protein Y49F6A.4 protein.
          Length = 514

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +3

Query: 24  LPKRGEPDDDIITIQGYEEKALQAKDAIMAIVHQLDNQCKEEVDIDPRVHRRLI 185
           L K    +   +T+  Y EK  Q +   + ++  ++ Q KE  ++   VHR+L+
Sbjct: 432 LEKFARENHRFLTLSLYREKQAQRRSPFVGLIGLMEKQAKEAEEMHEMVHRKLM 485


>Z81124-14|CAJ85776.1|  360|Caenorhabditis elegans Hypothetical
           protein T21B4.4b protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 219 P*YDVYSFPSTQSVFYEHGDQYQLLLCIGY 130
           P ++V+ F  TQS+F E+G+     + + Y
Sbjct: 137 PLFNVFGFAETQSLFIENGEMCHFTMVVDY 166


>Z81124-13|CAJ85775.1|  362|Caenorhabditis elegans Hypothetical
           protein T21B4.4a protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 219 P*YDVYSFPSTQSVFYEHGDQYQLLLCIGY 130
           P ++V+ F  TQS+F E+G+     + + Y
Sbjct: 137 PLFNVFGFAETQSLFIENGEMCHFTMVVDY 166


>U97403-4|AAB52474.2|  445|Caenorhabditis elegans Hypothetical
           protein T10E9.7a protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 24/91 (26%), Positives = 44/91 (48%)
 Frame = +3

Query: 156 IDPRVHRRLIGLRGKNIRRIMDEFKVDIRFPKHGDDSVXGXITGDEDNVLDAKDHLLNLA 335
           +D  +  + IG  G NI +I    KV +   K+ +++    ITG   N+  A + +L L 
Sbjct: 14  LDSSLLGQFIGPEGSNIYKIEKYNKVALDIWKNDEENSNVRITGPYWNLKSALNDVLELV 73

Query: 336 EEYLQDVADRYQAPAAPSLADFGSVLNENSS 428
              +++   RY+    PS  D G ++ +N +
Sbjct: 74  ST-IRNKNQRYKF-EMPS-KDIGFLIGKNGA 101


>AL023844-8|CAA19534.1|  396|Caenorhabditis elegans Hypothetical
           protein Y48A6B.13 protein.
          Length = 396

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -3

Query: 494 PLSPQNQQQQAFRYSR-SLHAAGTRVFVQNTTEVSERRRGWRLVTIG 357
           P +PQ+QQQQ F+ +R + H+     F+ +T + + +    + ++ G
Sbjct: 151 PATPQSQQQQHFQRNRPAAHSTTLADFIDSTKKETHKNVKHKKISAG 197


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,179,580
Number of Sequences: 27780
Number of extensions: 269809
Number of successful extensions: 869
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -