Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K20
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    26   0.27 
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   5.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   7.6  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 463 ACCCWFCGERGSVGAT 510
           +CCCW C   G  G++
Sbjct: 10  SCCCWCCDNLGGPGSS 25


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 106 LWRSYINWITNAKKKLILIPVFIE 177
           LWR    W+      +I IPV I+
Sbjct: 2   LWRMTGTWVGGFCHSIIQIPVIIQ 25


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 241 RMSTLNSSIIRRIFFP 194
           RM  LN   + R+FFP
Sbjct: 395 RMRALNIDRVSRVFFP 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,955
Number of Sequences: 438
Number of extensions: 3514
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)