Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_K17
(593 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 138 4e-33
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 104 6e-23
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 96 2e-20
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 28 6.5
SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09) 28 6.5
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 138 bits (333), Expect = 4e-33
Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 3/197 (1%)
Frame = +1
Query: 4 IASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIK--GVDLKLANKVYIANGNELND 177
+ + G + ++ K FP D K F D Q + + G + +AN+++ G E+ +
Sbjct: 46 LGARGNTATQMTKTFHFPTDVPEK--FHDFLQALNASNSDGNQILMANRLFAQMGFEILE 103
Query: 178 QFAVVSRDVFNSEVQNLNFGKNEEAA-NIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLV 354
+F S++ F++E+ +++ KN A + +N WVE T +IKNL+ + T LV
Sbjct: 104 EFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNLIPEGMFNKDTILCLV 163
Query: 355 NAIYFKGSWKDKFDKELTQDRPFHVNKDKTIQVPTMYKRGDFAYGESSELDAKLIELPYV 534
NA+YFKGSW F++ TQ F + IQV MY+ +F Y ESS L +++ELPY
Sbjct: 164 NAVYFKGSWMKHFNRNATQSGKFKTTPSQEIQVQFMYQSSEFRYLESSTLGCQIVELPYA 223
Query: 535 GEESSLLVVLPNKIDGL 585
GE+ S++V+LPN++DGL
Sbjct: 224 GEKLSMVVLLPNEVDGL 240
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 104 bits (249), Expect = 6e-23
Identities = 47/155 (30%), Positives = 88/155 (56%), Gaps = 1/155 (0%)
Frame = +1
Query: 124 DLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTNKRI 300
++ +AN +++ + +F + + +++++ +++ + E A +N WVE+ T K+I
Sbjct: 49 EMSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108
Query: 301 KNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKDKTIQVPTMYKRGDF 480
+L+ P + T+ LVNAIYFKG W F KE + F ++V M+++ F
Sbjct: 109 CDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEVEVEMMFQKSKF 168
Query: 481 AYGESSELDAKLIELPYVGEESSLLVVLPNKIDGL 585
Y S + KL+ELPYV + S+++VLP++ +GL
Sbjct: 169 KYLHSDKYKCKLLELPYVDTQLSMVLVLPDETEGL 203
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/157 (28%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Frame = +1
Query: 124 DLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVEDHTNKRI 300
+++L NK++ + E+ ++F +R+ ++SE+ ++F K +A +N WV T I
Sbjct: 54 EIQLVNKIWGHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNI 113
Query: 301 KNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHV--NKDKTIQVPTMYKRG 474
K L+ ++S T+ ++VNA+YFKG WK +F +E T F V + + I+V M ++
Sbjct: 114 KELIPHGVINSLTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESHESKIEVEMMTRKM 173
Query: 475 DFAYGESSELDAKLIELPYVGEESSLLVVLPNKIDGL 585
+ +++ +++ELPY G++++++++LP + G+
Sbjct: 174 KVNFYYDADIKCRVVELPYSGDDTAMVIILPEEPSGI 210
>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Frame = +1
Query: 97 QKVRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWV 276
Q+ I+ + + YIA +L ++ + + ++V ++ G +EAA W
Sbjct: 808 QQCTEIEEAMMNEVQRFYIAWNKKL-EELKRRNGQMSPTDVNSMWIGATDEAAEGHFVWE 866
Query: 277 EDHTNKRIKNLV--DPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQ---DRPF 423
D T N +P+ CV + A YF G W D F ++ ++PF
Sbjct: 867 GDGTVVNYTNWFRGEPNDHSGKEDCVEMMAGYFAGYWNDNFCEQFRNFICEKPF 920
>SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -3
Query: 426 MEWTVLCQFLIKFVFPTSLK--VNCIYENTLC 337
M++ +L VFPT K V CIYEN C
Sbjct: 405 MKYVYTQSWLFTLVFPTQQKRVVQCIYENESC 436
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +2
Query: 308 WWIL---VRWTVAHSVFS*MQFTLREVGKTN 391
WW++ VRW + H + LR+VGK N
Sbjct: 224 WWLIPESVRWLLTHERSKEAEMILRKVGKFN 254
>SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09)
Length = 227
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 154 ANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDH 285
A G ++ QF+V+ R +F S +++ EE + W++ H
Sbjct: 116 ATGAPVSRQFSVLLRQLFESYNSSVSTTNPEEFCRTVLAWLDQH 159
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.132 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,956,516
Number of Sequences: 59808
Number of extensions: 332569
Number of successful extensions: 588
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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