Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K15
         (624 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_36805| Best HMM Match : GED (HMM E-Value=0.24)                      28   7.1  
SB_26513| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_10875| Best HMM Match : TIL (HMM E-Value=6.8)                       28   7.1  
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.1  
SB_17137| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  

>SB_36805| Best HMM Match : GED (HMM E-Value=0.24)
          Length = 377

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 138 QDVDQVNVDDEYYKIGKDYDVEANIDNYTNKTAVEEFLKLYRIGYLPKYY 287
           + V QV +  ++ K G+ +D   +I+N  ++  V  +LK Y      KYY
Sbjct: 49  EGVGQVVIHRKFMKPGELFDFPVSIENGKSRKFVSNWLKKYPWLAYSKYY 98


>SB_26513| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1460

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 117 KKVLSLFQDVDQVNVDDEYYKIGKDY-DVEAN-IDNYTNKTAVEEFLKLYRI 266
           ++ +SLF+DVD+   D+ Y KI   Y D+  + ID Y    +   F KL ++
Sbjct: 93  ERCISLFKDVDKYKHDERYLKIWIQYADLCTDPIDVYDYMHSQSMFSKLAKL 144


>SB_10875| Best HMM Match : TIL (HMM E-Value=6.8)
          Length = 62

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 47  QCGVTENVSLQDKRCRRSVCG 109
           +C + +NV   D+ CRRS CG
Sbjct: 29  KCHMEKNVIFDDRACRRSRCG 49


>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 572

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +3

Query: 120 KVLSLFQDVDQVNVDDEYYKIGKDYDVEANIDNYTNKTAV-EEFLKLYRIGYLPKYYEFS 296
           +VL + +DVD   +   Y K+   +  + N+DN    T V  E  + Y +   P   +  
Sbjct: 7   EVLGVERDVDDSALKKTYRKLALKWHPDKNLDNAEESTRVFREIQQAYDVLSDP---QER 63

Query: 297 IFYQKLREEAI 329
            FY K RE+ +
Sbjct: 64  AFYDKHREQIL 74


>SB_17137| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 682

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +3

Query: 84  KDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANI 212
           KD D   V +QK VL + + +  +++     K+ +DY VE ++
Sbjct: 401 KDADIAPVPKQKPVLDINKHLRPISLTPVLSKLAEDYIVEQHL 443


>SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3610

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +3

Query: 21   AGLIALVQSSVVSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGK 188
            +G+I L + + V+   Y+FK K  D +F      +L +   +DQ N   ++   G+
Sbjct: 1370 SGIITLSREAPVNVWEYNFKVKATDGIFTATTDVLLDI---IDQNNHKPQFTNCGE 1422


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,868,153
Number of Sequences: 59808
Number of extensions: 388037
Number of successful extensions: 1693
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1692
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)