Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K14
         (346 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   1.3  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   1.8  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    20   9.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   9.5  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -3

Query: 335 YCGANKPLKD--IFVVSP*SEKKTNGEIFTHTYCEYNNIVIFILVKSLIR 192
           + G+NKP+KD  + V+S   +K  N +     + + N  ++   VK LIR
Sbjct: 364 FVGSNKPVKDEYMLVLSNRMQKIVNDDF---NFDDVNFRILGANVKELIR 410


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 339 KVLWRK*TIERYFCRVTIE 283
           KV+W+   I + FC + +E
Sbjct: 132 KVVWKPPAIYKSFCEIDVE 150


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 192 PDEAFYQYKNHYIIIFTI 245
           PD  FY  K+ Y+   T+
Sbjct: 120 PDTYFYNGKHSYVHTITV 137


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 260 IFTHTYCEYNNIVIFILVKSLIRAF 186
           IFT+    + N+V+   VK ++  F
Sbjct: 2   IFTNNIAAFQNVVLVKKVKIVLLIF 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,888
Number of Sequences: 438
Number of extensions: 1924
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)