Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K12
         (378 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC133019-1|AAI33020.1| 1427|Homo sapiens CCDC144A protein protein.     28   8.8  
BC104815-1|AAI04816.1|  725|Homo sapiens coiled-coil domain cont...    28   8.8  
BC101585-1|AAI01586.1|  725|Homo sapiens coiled-coil domain cont...    28   8.8  
BC062767-1|AAH62767.1|  271|Homo sapiens CCDC144B protein protein.     28   8.8  
BC036241-1|AAH36241.2|  226|Homo sapiens coiled-coil domain cont...    28   8.8  
AK093811-1|BAC04228.1|  571|Homo sapiens protein ( Homo sapiens ...    28   8.8  

>BC133019-1|AAI33020.1| 1427|Homo sapiens CCDC144A protein protein.
          Length = 1427

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 24  SLP-SCNPVWCPENVSLQEQRCRRS 95
           SLP + NP W P N++L ++ C+RS
Sbjct: 131 SLPQNNNPDWHPTNLTLSDETCQRS 155


>BC104815-1|AAI04816.1|  725|Homo sapiens coiled-coil domain
           containing 144B protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 24  SLP-SCNPVWCPENVSLQEQRCRRS 95
           SLP + NP W P N++L ++ C+RS
Sbjct: 131 SLPQNNNPDWHPTNLTLSDETCQRS 155


>BC101585-1|AAI01586.1|  725|Homo sapiens coiled-coil domain
           containing 144B protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 24  SLP-SCNPVWCPENVSLQEQRCRRS 95
           SLP + NP W P N++L ++ C+RS
Sbjct: 131 SLPQNNNPDWHPTNLTLSDETCQRS 155


>BC062767-1|AAH62767.1|  271|Homo sapiens CCDC144B protein protein.
          Length = 271

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 24  SLP-SCNPVWCPENVSLQEQRCRRS 95
           SLP + NP W P N++L ++ C+RS
Sbjct: 131 SLPQNNNPDWHPTNLTLSDETCQRS 155


>BC036241-1|AAH36241.2|  226|Homo sapiens coiled-coil domain
           containing 144C protein.
          Length = 226

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 24  SLP-SCNPVWCPENVSLQEQRCRRS 95
           SLP + NP W P N++L ++ C+RS
Sbjct: 131 SLPQNNNPDWHPTNLTLSDETCQRS 155


>AK093811-1|BAC04228.1|  571|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36492 fis, clone THYMU2018455. ).
          Length = 571

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 24  SLP-SCNPVWCPENVSLQEQRCRRS 95
           SLP + NP W P N++L ++ C+RS
Sbjct: 131 SLPQNNNPDWHPTNLTLSDETCQRS 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,256,132
Number of Sequences: 237096
Number of extensions: 1157534
Number of successful extensions: 5998
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5998
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)