Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K11
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.0  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   4.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.2  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 485 VNSAIGVYHVDVFSVCVF 538
           V +A+  Y VD+ S C F
Sbjct: 166 VKTAMKKYSVDIISTCAF 183


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 172 GIIRSIGAVGSSIFQ 128
           GI+RS+G +GS + +
Sbjct: 221 GIVRSLGTLGSRVVE 235


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 472 PCGHADYYPNSGSQQPNCLFQTCSHSRAVLL 380
           PC +   Y +    QP+   Q  S    VLL
Sbjct: 65  PCNNTANYKSEAQNQPSSYKQPSSDMADVLL 95


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +2

Query: 116 YILELKYGRADSSNTPDDPLVVFVNGTVYP 205
           Y  E  YG   S  TP  P  V+ +    P
Sbjct: 42  YHYEDPYGYTGSEETPPSPQEVYYHHQTIP 71


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +2

Query: 116 YILELKYGRADSSNTPDDPLVVFVNGTVYP 205
           Y  E  YG   S  TP  P  V+ +    P
Sbjct: 42  YHYEDPYGYTGSEETPPSPQEVYYHHQTIP 71


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +2

Query: 116 YILELKYGRADSSNTPDDPLVVFVNGTVYP 205
           Y  E  YG   S  TP  P  V+ +    P
Sbjct: 42  YHYEDPYGYTGSEETPPSPQEVYYHHQTIP 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,746
Number of Sequences: 336
Number of extensions: 3124
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)