Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_K11
         (543 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g06590.1 68414.m00698 expressed protein                             30   0.87 
At3g04320.1 68416.m00457 trypsin and protease inhibitor family p...    30   1.1  
At5g57840.1 68418.m07233 transferase family protein similar to a...    29   2.0  
At2g47460.1 68415.m05923 myb family transcription factor (MYB12)...    28   4.6  

>At1g06590.1 68414.m00698 expressed protein
          Length = 916

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -3

Query: 481 LKEPCGHADYYPNSGSQQPNCLFQTCSHSRAVLLYGESIGNVNAFPAVRCKDWESF 314
           L++P G     P+SGS++ +  FQ C H   V + G     + A   +R   WE +
Sbjct: 542 LQKPWGPPVISPDSGSRKSSTFFQLCDH--LVSIPGSVSQLIGASYLLRATSWELY 595


>At3g04320.1 68416.m00457 trypsin and protease inhibitor family
           protein / Kunitz family protein weak similarity to
           Kunitz trypsin inhibitor TI1 [Populus tremuloides]
           GI:13605350; contains Pfam profile PF00197: Trypsin and
           protease inhibitor
          Length = 244

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 116 YILELKYGRADSSNTPDDPLVVFVNGTVYPVPVRRILA 229
           +I  ++YG  D ++ P  PL+V       P PV  +LA
Sbjct: 97  WICRMQYGSTDPNSCPQQPLMVTHPNLAAPTPVMFVLA 134


>At5g57840.1 68418.m07233 transferase family protein similar to
           anthranilate N-hydroxycinnamoyl/benzoyltransferase from
           Dianthus caryophyllus [gi:2239091]
          Length = 443

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = +2

Query: 302 LSDSK--GLPVLAPDSWECVHVADRLAVEQHGATVAARLEKAVRLLGSAVRVVVGVTTGF 475
           ++DSK     VL   +W C   A+    E+H   +   ++   RL     +  +G T   
Sbjct: 247 IADSKFSTYEVLVAHTWRCASFANEDLSEEHSTRLHIIIDGRPRLQPKLPQGYIGNTLFH 306

Query: 476 L*PVNSAIGVYHVDVFSVCV 535
             PV S +G +H + FS  V
Sbjct: 307 ARPV-SPLGAFHRESFSETV 325


>At2g47460.1 68415.m05923 myb family transcription factor (MYB12)
           similar to myb-related DNA-binding protein GI:1020155
           from [Arabidopsis thaliana]
          Length = 371

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 20/93 (21%), Positives = 40/93 (43%)
 Frame = -3

Query: 499 DGGVYGLKEPCGHADYYPNSGSQQPNCLFQTCSHSRAVLLYGESIGNVNAFPAVRCKDWE 320
           DG ++ +++  G   +         +CL Q+C    + L Y   + + +    +   DW+
Sbjct: 255 DGELHNIRDSEGARGFSDTWNQGNLDCLLQSCPSVESFLNYDHQVNDASTDEFI---DWD 311

Query: 319 SFRIGQCDTDIKLMGYGSTPDTRGIYFLLTGED 221
              + Q  +D  L      PD+  + +LL G+D
Sbjct: 312 C--VWQEGSDNNLWHEKENPDSM-VSWLLDGDD 341


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,683,225
Number of Sequences: 28952
Number of extensions: 248985
Number of successful extensions: 573
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1013649368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)